Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq25 109 3e-22 >seq25 Length=141646 Score = 109 bits (120), Expect = 3e-22 Identities = 75/81 (93%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 |||| |||||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct 2583 AAGTCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAG 2640 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| Sbjct 2641 GGACGTAAT-CAACGCAAGCT 2660 Score = 109 bits (120), Expect = 3e-22 Identities = 75/81 (93%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 |||| |||||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct 11043 AAGTCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAG 11100 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| Sbjct 11101 GGACGTAAT-CAACGCAAGCT 11120 Score = 109 bits (120), Expect = 3e-22 Identities = 75/81 (93%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 |||| |||||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct 23071 AAGTCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAG 23128 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| Sbjct 23129 GGACGTAAT-CAACGCAAGCT 23148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799805420