Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq25 706 0.0 >seq25 Length=141646 Score = 706 bits (782), Expect = 0.0 Identities = 466/507 (92%), Gaps = 9/507 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||| ||| |||||| || |||||||||||||||||| Sbjct 12203 GTACTCATTCCAATTACAAGACCCAGAAGGGCCCTGCATTGTTATTTATTGTCACTACCT 12262 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12263 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 12322 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 12323 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 12382 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| || Sbjct 12383 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAGCA 12442 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | ||| Sbjct 12443 CAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATGG- 12497 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTA-GCATGTATTAGCTC 357 ||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct 12498 TTTTTATCTAATAAATACACCCCTTCCACAAGTCGGGGCTTTTTACGCATGTATTAGCTC 12557 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||| Sbjct 12558 TAGAATTACCACAGTTATCCATGTAGTAAGAAAC-ATCAAATAAACTATAACTGATTTAA 12616 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 12617 TGAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAATCT 12676 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 12677 TTGAGACAAGCATATGACTACTGGCAG 12703 Score = 706 bits (782), Expect = 0.0 Identities = 466/507 (92%), Gaps = 9/507 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||| ||| |||||| || |||||||||||||||||| Sbjct 24231 GTACTCATTCCAATTACAAGACCCAGAAGGGCCCTGCATTGTTATTTATTGTCACTACCT 24290 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24291 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 24350 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 24351 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 24410 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| || Sbjct 24411 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAGCA 24470 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | ||| Sbjct 24471 CAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATGG- 24525 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTA-GCATGTATTAGCTC 357 ||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct 24526 TTTTTATCTAATAAATACACCCCTTCCACAAGTCGGGGCTTTTTACGCATGTATTAGCTC 24585 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||||| Sbjct 24586 TAGAATTACCACAGTTATCCATGTAGTAAGAAAC-ATCAAATAAACTATAACTGATTTAA 24644 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 24645 TGAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAATCT 24704 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 24705 TTGAGACAAGCATATGACTACTGGCAG 24731 Score = 668 bits (740), Expect = 0.0 Identities = 459/509 (90%), Gaps = 18/509 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGAC--CCAAAAGAGCCCTGTATCAGTATTTATTGTCACTAC 58 |||||||||||||||||||||| ||| ||| |||||| || ||||| |||| Sbjct 4042 GTACTCATTCCAATTACAAGACACCCAGAAGGGCCCTGCATTGTTATTT-------CTAC 4094 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4095 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 4154 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct 4155 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGG 4214 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 |||||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| | Sbjct 4215 TAGGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAG 4274 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG 298 | ||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | || Sbjct 4275 CACAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATG 4330 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTA-GCATGTATTAGC 355 | ||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| Sbjct 4331 G-TTTTTATCTAATAAATACACCCCTTCCACAAGTCGGGGCTTTTTACGCATGTATTAGC 4389 Query 356 TCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||||||||||| ||||||||||||||||| || ||||||||||| ||||||||||| Sbjct 4390 TCTAGAATTACCACAGTTATCCATGTAGTAAGAAAC-ATCAAATAAACTATAACTGATTT 4448 Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475 |||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| Sbjct 4449 AATGAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAAT 4508 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| Sbjct 4509 CTTTGAGACAAGCATATGACTACTGGCAG 4537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398957824