Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F000772675.1_202014-11- 06] 69 sequences; 19,776,778 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq19 372 2e-98 seq9 219 3e-52 >seq19 Length=568126 Score = 372 bits (412), Expect = 2e-98 Identities = 1232/1882 (65%), Gaps = 68/1882 (4%) Strand=Plus/Minus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 |||||||| || || || | || | |||||| | || ||||| | ||||||||||| Sbjct 50095 GTGAACTGAATGGCGTTGGAGGCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGA 50036 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACA 65203 || ||| | ||||| |||||||| | | | || | | ||| | | | Sbjct 50035 CCCTTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGGCCAAAGGTAGGCGCCGAGAGG 49976 Query 65204 TGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATG 65263 || || || | |||||| ||| |||| || |||||| || || |||||||| ||| Sbjct 49975 TGAATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATG 49916 Query 65264 ATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGA-A 65321 || | | || | | |||||||||||||||||||| || | | | | | || | Sbjct 49915 ATG-GCCTTCTGGCTGATCTCCCAGACGGTCTTGTAGAG-CTTCTTGATGCGGTCGGGGA 49858 Query 65322 TCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTG 65381 | | | || ||||| ||||| | | || || ||||| || ||||| || Sbjct 49857 TGCCGGGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCTTCATCGTGTCGT 49798 Query 65382 ACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCGC 65441 ||||| |||| |||| || | | | ||| | | || | || |||||||| | Sbjct 49797 TCCACAGACCCTGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGAACTCAC 49738 Query 65442 CGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGC 65501 ||| || |||||||| ||||||||||||||| || || ||| | || || || Sbjct 49737 CGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAGC 49678 Query 65502 CTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATC 65561 | || || || || || || || ||||||||||||| || | ||||| |||| | Sbjct 49677 CGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGAC 49618 Query 65562 CGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCG 65617 ||| | | | || ||| ||| || ||| |||||| ||| | ||| || | Sbjct 49617 CGTGCTTGGCGATCTTGGCCTTGA-GC---TCGGCCCAGTCCCAGA--GGTC---CGAGG 49567 Query 65618 ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG----GCCGGTGAACCGAG 65673 | ||| |||||| || | ||||| || ||| || || || ||| Sbjct 49566 GGGTG-ACGCCCCACATGTCGTACTGCAGCTCACC----CTGCGAAGCGGGCGAGCCGGC 49512 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCGGCAA 65732 | | | ||||| || | || || || || | || | | | |||||| ||||| Sbjct 49511 GTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCG-CTCGAGAGCGGCGT 49453 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 || ||||||||||| || | || || ||| ||||| ||| | ||| Sbjct 49452 GGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAA-GGCG 49394 Query 65793 TA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || ||||| | | || | |||||| ||||| || || || |||||||||||||| || Sbjct 49393 TAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 49334 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| ||||| || | ||||| || |||||||| ||||| ||||| || || Sbjct 49333 CGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTA 49274 Query 65912 AAATTGCGTGTCACCACATGCAC---GATACGTCG--CAATTGTTCGAAATCAAAATGTT 65966 | || | || || ||| | | || ||| || ||| ||| || | || Sbjct 49273 AGGTT-CTTG----CAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTAC-GTC 49220 Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 | || ||| |||| | || | || |||| ||||| | || || | ||||| Sbjct 49219 TTGG-CGA-CGGG---GTCG------ATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGC 49171 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 ||||||| | |||||| || ||| | ||||||| ||| |||||||||| || ||| Sbjct 49170 AGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACT 49111 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 |||||||| | |||| || || |||||||| || ||||||||||| | ||| Sbjct 49110 TGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGA 49051 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206 | || |||||||||| || ||||| | |||||||| ||| || | ||||| | Sbjct 49050 AGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTGA 48991 Query 66207 CCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCAC 66266 | || || || | || | | ||||| | ||||||||| | || || || | Sbjct 48990 CGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGC 48931 Query 66267 CCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326 | | || | || | || |||| || || ||||| |||||||| || || | || Sbjct 48930 CGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCT 48871 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 | || || | ||| || ||||| || | |||||| ||||||||||| || || || | Sbjct 48870 GCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCAC 48811 Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | |||||| ||||||| || ||||| | ||||||||||||||||| ||| | |||| Sbjct 48810 GCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCC 48751 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 |||| || | ||| ||||| || | || ||| ||| |||||| ||||||||||||| Sbjct 48750 ATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGC 48691 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 | ||| ||||||||||| || | ||| || |||| ||||| || ||||| | Sbjct 48690 GGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGGTAC 48631 Query 66567 CGTCGATGGGGGATCCTCGTGCC-CGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 || | ||| ||| || ||||| || || ||| | || || || ||||||||||| Sbjct 48630 CGGCAATGTAGGAACC-GGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCG 48572 Query 66626 GTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683 ||||| ||||| ||||| || | | || | | ||||| || || ||||| Sbjct 48571 GTCTTGGAGATCATGGCACA--CGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGT 48514 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 |||| ||||| | |||| |||| || || || || | || || | || ||||| Sbjct 48513 CCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGA 48454 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 ||||||| | ||||| |||||||| | | |||||| ||||| ||||| ||| | Sbjct 48453 GGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGC 48394 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCG- 66861 || |||| | ||| || || |||| || ||| ||||| || | || || || || Sbjct 48393 TCTCGATGTCCTGGCCGTGGATACCGACGGCGACA-CGCATGAGCATGTGCTGGGGACGC 48335 Query 66862 --TTCGACC-AGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACC 66918 | ||||| |||| ||||| | | | ||||||||| || || ||||||| || Sbjct 48334 TCTGCGACCTTGCCG----TTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCC 48279 Query 66919 AAAGTACGAGTAATTGAAATCG 66940 ||| | ||| | ||| ||| Sbjct 48278 GAAGAAGTTGTAGTGGAAGTCG 48257 >seq9 Length=823499 Score = 219 bits (242), Expect = 3e-52 Identities = 383/547 (70%), Gaps = 13/547 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| || |||||||||||||| | || ||| |||| | Sbjct 594438 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 594379 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||||| | | | ||| | |||| || || || Sbjct 594378 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAACGA-CAACGAACGCCACTTTATCTC 594320 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| |||||||| |||||||||||||| ||||| | | || || Sbjct 594319 GCACGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAGCG 594260 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| || | | ||||||||| | ||||| ||||| |||||||| |||||||| | Sbjct 594259 TTTCAGCTCCG-AGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 594201 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| |||||||||||| ||| | |||||||| || ||||| | |||| | Sbjct 594200 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATTCGCGAGCCCG 594141 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | | || || | | || | ||| ||||||| || || | || |||| |||||| | Sbjct 594140 AGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAGCCG 594081 Query 61442 ATTGGGC-CTTCAATTGGATCACCAGTACAA-CG-GCTACATTTGGTGAACGATTGCTGG 61498 | ||||| || | | ||||||| | |||| || || || || | || || | | | Sbjct 594080 ACTGGGCGCTGCGA-TGGATCAGC--GACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCG 594024 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | ||||| | || || || | || ||| || || || ||| | ||||| ||| | | Sbjct 594023 CCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCA 593964 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| || || || ||||||||||| |||||| ||| ||| | || || |||||||| | Sbjct 593963 AGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 593904 Query 61619 GCATGCA 61625 | |||| Sbjct 593903 GTCTGCA 593897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567665670160