Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq23 372 1e-100 >seq23 Length=140422 Score = 372 bits (412), Expect = 1e-100 Identities = 251/279 (90%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 122263 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 122322 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| |||||||||||| |||||||| || | ||||||||||||||| ||| Sbjct 122323 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCAATC 122380 Query 528 CTGATGTCTTCGGAT---GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 || | ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 122381 CTCACGTCTTTAGATCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATGGT 122440 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 122441 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 122500 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||||||||||||||||||| Sbjct 122501 GACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 122539 Score = 372 bits (412), Expect = 1e-100 Identities = 251/279 (90%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 130427 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 130486 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| |||||||||||| |||||||| || | ||||||||||||||| ||| Sbjct 130487 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCAATC 130544 Query 528 CTGATGTCTTCGGAT---GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 || | ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 130545 CTCACGTCTTTAGATCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATGGT 130604 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 130605 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 130664 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||||||||||||||||||| Sbjct 130665 GACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 130703 Score = 372 bits (412), Expect = 1e-100 Identities = 251/279 (90%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 138591 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 138650 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| |||||||||||| |||||||| || | ||||||||||||||| ||| Sbjct 138651 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCAATC 138708 Query 528 CTGATGTCTTCGGAT---GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 || | ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 138709 CTCACGTCTTTAGATCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATGGT 138768 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 138769 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCT 138828 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||||||||||||||||||| Sbjct 138829 GACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 138867 Score = 210 bits (232), Expect = 9e-52 Identities = 145/164 (88%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||||||| | ||||| | Sbjct 121858 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAGG 121917 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 121918 CTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 121977 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| ||||||||||||| || ||||||||||| ||||||||| Sbjct 121978 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 122021 Score = 210 bits (232), Expect = 9e-52 Identities = 145/164 (88%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||||||| | ||||| | Sbjct 130022 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAGG 130081 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 130082 CTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 130141 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| ||||||||||||| || ||||||||||| ||||||||| Sbjct 130142 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 130185 Score = 210 bits (232), Expect = 9e-52 Identities = 145/164 (88%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| ||||||||||||||||||||||||||||| ||||||| ||||||| | ||||| | Sbjct 138186 TTCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATGCCATCTAAGG 138245 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 138246 CTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 138305 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||| ||||||||||||| || ||||||||||| ||||||||| Sbjct 138306 TTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 138349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999420850