Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq16 118 2e-24 >seq16 Length=653278 Score = 118 bits (130), Expect = 2e-24 Identities = 185/261 (71%), Gaps = 9/261 (3%) Strand=Plus/Minus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| ||||| ||||||||| ||| || ||||| ||||||||||||| || | ||| Sbjct 421392 TTCGCCGTGATTGCCCTCGTTATTGGCGAGACCGAAGAGGCGCTCCTTGAGCATGCGATC 421333 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGC----CTTGTCACTGAACC 164 ||||||| |||||||||| || || ||| || || ||||| || | Sbjct 421332 TTTGCCGTTCCAGAGGGCCAGGCTCAAGC-CCA---TTCTGCAGTGGTTGTCCGAGAGAC 421277 Query 165 CCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGT 224 | || || || ||||| ||||| || |||| ||||| || || || |||||||||| Sbjct 421276 CAGCGAGACCATCCTCACCCCATCGATAGGTACGGCTACGAGCCGACTCGTGGGGGAAGT 421217 Query 225 AGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGC 284 | |||||| || || | | | |||||| || || || || ||||| || || |||| Sbjct 421216 GCGACCAGGCATCTCCGTTGACCGAGTAGTCCTCACGGACGGTACCCCACTGACGCTCGC 421157 Query 285 TCAGGTAGGGGCCCCACTCGC 305 | ||||| |||||||| |||| Sbjct 421156 TGAGGTAAGGGCCCCA-TCGC 421137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999727840