Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq23 724 0.0 >seq23 Length=140422 Score = 724 bits (802), Expect = 0.0 Identities = 484/537 (90%), Gaps = 4/537 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 124311 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 124252 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 124251 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCAACTCGGATC 124192 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || | |||| ||| || ||| || || |||| |||||||||||| Sbjct 124191 AAGCATA-AATGCTTTTAAGTCCAAAAGGTGGGTCGTTAAACCCAGCTCCGCTTCATTGG 124133 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||| | ||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 124132 ATAAGTAAAGAGACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 124076 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| ||||||| ||| ||||||||||||||||||||||||||| Sbjct 124075 TTCTACACCCTCCATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 124016 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 124015 TTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 123956 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123955 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 123896 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123895 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 123836 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 123835 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 123779 Score = 724 bits (802), Expect = 0.0 Identities = 484/537 (90%), Gaps = 4/537 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132475 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 132416 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 132415 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTCCAACTCGGATC 132356 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || | |||| ||| || ||| || || |||| |||||||||||| Sbjct 132355 AAGCATA-AATGCTTTTAAGTCCAAAAGGTGGGTCGTTAAACCCAGCTCCGCTTCATTGG 132297 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||| | ||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 132296 ATAAGTAAAGAGACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 132240 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| ||||||| ||| ||||||||||||||||||||||||||| Sbjct 132239 TTCTACACCCTCCATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 132180 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 132179 TTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 132120 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132119 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 132060 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132059 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 132000 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 131999 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 131943 Score = 499 bits (552), Expect = 1e-138 Identities = 303/319 (95%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 225 GCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG 284 |||||||| |||||||||||||||||||| || ||| ||||||| ||| ||||| Sbjct 140421 GCGCCGAA---GCTCCCACTTATTCTACACCCTCCATGTCTCTTCACAATGTCAAACTAG 140365 Query 285 AGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344 |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 140364 AGTCAAGCTCAACAGG-TCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTG 140306 Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140305 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 140246 Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140245 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 140186 Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140185 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 140126 Query 525 GCGTCAACATCACTTTCTG 543 ||||||||| ||||||||| Sbjct 140125 GCGTCAACACCACTTTCTG 140107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199558496