Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporisorium_20scitamineum_20[genbank_20GCA_5F001010845.1_202015-05- 20] 27 sequences; 20,067,589 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq19 369 3e-97 seq8 219 3e-52 >seq19 Length=580969 Score = 369 bits (408), Expect = 3e-97 Identities = 1232/1882 (65%), Gaps = 69/1882 (4%) Strand=Plus/Plus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 |||||||| || || || | || | |||||| | || ||||| | ||||||||||| Sbjct 519220 GTGAACTGAATGGCGTTGGAGGCAGGCTTGGTACGCAGGTAGTAGGTACCGGTCTTGAGA 519279 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACA 65203 || ||| | ||||| |||||||| | | | || | | ||| | | | Sbjct 519280 CCCTTCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGGCCAAAGGTAGGCGCCGAGAGG 519339 Query 65204 TGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATG 65263 || || || | |||||| ||| |||| || |||||| || || |||||||| ||| Sbjct 519340 TGAATGTTGAGCGACTGCGACTGGCAGATGAAAGCACCACGGTCGGCGGCCATGTCGATG 519399 Query 65264 ATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGA-A 65321 || | | || | | |||||||||||||||||||| || | | | | | || | Sbjct 519400 ATG-GCCTTCTGGCTGATCTCCCAGACGGTCTTGTAGAG-CTTCTTGATGCGGTCGGGGA 519457 Query 65322 TCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCTG 65381 | | | || ||||| ||||| | | || || ||||| || ||||| || Sbjct 519458 TGCCGGGCACGTTCTGGATGGAACCGCCGTGAGCGATGATGCGGTTCTTCATCGTGTCGT 519517 Query 65382 ACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCGC 65441 ||||| |||| |||| || | | | ||| | | || | || |||||||| | Sbjct 519518 TCCACAGACCCTGCTCGACGAGCTCGCGGAGCAACCAAGGGTTCACCACCTGGAACTCAC 519577 Query 65442 CGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGC 65501 ||| || |||||||| ||||||||||||||| || || ||| | || || || Sbjct 519578 CGGCGAGCACACGACGCGAGTAGATGTTGGACGTGTAAGGCTCGAAGCACTCGTTGAAGC 519637 Query 65502 CTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATC 65561 | || || || || || || || ||||||||||||| || | ||||| |||| | Sbjct 519638 CGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGAGCGAGCAGAAGCGAGTTGCGCAGAC 519697 Query 65562 CGTTCATTTCAATGTTG----TGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTCG 65617 ||| | | | || ||| ||| || ||| |||||| ||| | ||| || | Sbjct 519698 CGTGCTTGGCGATCTTGGCCTTGA-GC---TCGGCCCAGTCCCAGA--GGTC---CGAGG 519748 Query 65618 ACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG----GCCGGTGAACCGAG 65673 | ||| |||||| || | ||||| || ||| || || || ||| Sbjct 519749 GGGTG-ACGC-CCACATGTCGTACTGCAGCTCACC----CTGCGAAGCGGGCGAGCCGGC 519802 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCGGCAA 65732 | | | ||||| || | || || || || | || | | | |||||| ||||| Sbjct 519803 GTAGGTCTCGTAGGTGCCGTGCTGCTGAGCCAGCTCGCACGATCG-CTCGAGAGCGGCGT 519861 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 || ||||||||||| || | || || ||| ||||| ||| | ||| Sbjct 519862 GGTAGATGGTCTCGAAGATATGCACGTTGAGACGACGAGCCTCGGGAGACTCAAA-GGCG 519920 Query 65793 TA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || ||||| | | || | |||||| ||||| || || || |||||||||||||| || Sbjct 519921 TAGCCCATGATCATGAAGGCGTCGGCAAGACCCTGGACACCGATACCGATGGGACGGTGG 519980 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| ||||| || | ||||| || |||||||| ||||| ||||| || || Sbjct 519981 CGCATGTTGGATCGACGGGCCTCCTCGACGGGGTAGTAGTTGATGTCGATGATCTTGTTA 520040 Query 65912 AAATTGCGTGTCACCACATGCAC---GATACGTCG--CAATTGTTCGAAATCAAAATGTT 65966 | || | || || ||| | | || ||| || ||| ||| || | || Sbjct 520041 AGGTT-CTTG----CAGATGGCCTTGGCGACCTCGTGCAGACGTTTGAAGTCGTAC-GTC 520094 Query 65967 TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGC 66026 | || ||| |||| | || | || |||| ||||| | || || | ||||| Sbjct 520095 TTGG-CGA-CGGG---GTCG------ATGAAGGTGGGGAGGGCGATCGAGGCCAAGTTGC 520143 Query 66027 AGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGC 66086 ||||||| | |||||| || ||| | ||||||| ||| |||||||||| || ||| Sbjct 520144 AGACAGCCACCTCGTCGGGGGCGCTGTACTCGATAATCTCGGTGCACAAGTTGGAGCACT 520203 Query 66087 GTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGT 66146 |||||||| | |||| || || |||||||| || ||||||||||| | ||| Sbjct 520204 TGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAGCGGCATCCTTGTAGAGGATGA 520263 Query 66147 ACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCA 66206 | || |||||||||| || ||||| | |||||||| ||| || | ||||| | Sbjct 520264 AGGGGTTGCCGGTCTCGGTCTGCGACTCGAGGATGGCGTACCAGAGCTTCTGGGCCTTGA 520323 Query 66207 CCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCAC 66266 | || || || | || | | ||||| | ||||||||| | || || || | Sbjct 520324 CGGTGCGCTTGGCACGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCAAACTCGTCGC 520383 Query 66267 CCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326 | | || | || | || |||| || || ||||| |||||||| || || | || Sbjct 520384 CGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGACCAGTCGCCGTTCT 520443 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 | || || | ||| || ||||| || | |||||| ||||||||||| || || || | Sbjct 520444 GCTCGACCCTCTTCATGAAGAGATCGGGCACCCAGAGTGCGTAGAAGAGCTCTCGGGCAC 520503 Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | |||||| ||||||| || ||||| | ||||||||||||||||| ||| | |||| Sbjct 520504 GCACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCCGAGTGCC 520563 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 |||| || | ||| ||||| || | || ||| ||| |||||| ||||||||||||| Sbjct 520564 ATGGCTCAACGTAAATGGCAAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGC 520623 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 | ||| ||||||||||| || | ||| || |||| ||||| || ||||| | Sbjct 520624 GGGCGGTGTTGTTGAAGACGCGGAGCATGGGCACGATACCGTTGCTGACACCGTTGGTAC 520683 Query 66567 CGTCGATGGGGGATCCTCGTGCC-CGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 || | ||| ||| || ||||| || || ||| | || || || ||||||||||| Sbjct 520684 CGGCAATGTAGGAACC-GGTGCCGCGGATGCAGTGGATGTTGAGGCCGATACCACCGGCG 520742 Query 66626 GTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683 ||||| ||||| ||||| || | | || | | ||||| || || ||||| Sbjct 520743 GTCTTGGAGATCATGGCACA--CGTCTTGAGCGTGTCGTAGATGCCATCGATCGAGTCGT 520800 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 |||| ||||| | |||| |||| || || || || | || || | || ||||| Sbjct 520801 CCTTCATGGTGACGAGGAAGCACGACGAGAGCTGAGGGTGCGGGGTACCTGCGTTGAAGA 520860 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 ||||||| | ||||| |||||||| | | |||||| ||||| ||||| ||| | Sbjct 520861 GGGTGGGGGAGGCGTGTGTAAAGTACTTTTGCGACATGAGGTTGTAGGTCTCAATGGCGC 520920 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCG- 66861 || |||| | ||| || || |||| || ||| ||||| || | || || || || Sbjct 520921 TCTCGATGTCCTGGCCGTGGATACCGACGGCGACA-CGCATGAGCATGTGCTGGGGACGC 520979 Query 66862 --TTCGACC-AGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACC 66918 | ||||| |||| ||||| | | | ||||||||| || || ||||||| || Sbjct 520980 TCTGCGACCTTGCCG----TTGATGCGGAGGAGGTAGGAGCGCTCGAGCGTCTTGAAGCC 521035 Query 66919 AAAGTACGAGTAATTGAAATCG 66940 ||| | ||| | ||| ||| Sbjct 521036 GAAGAAGTTGTAGTGGAAGTCG 521057 >seq8 Length=837966 Score = 219 bits (242), Expect = 3e-52 Identities = 383/547 (70%), Gaps = 13/547 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| || |||||||||||||| | || ||| |||| | Sbjct 244374 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCCTTCTGGACCGCCGAAGAGATCGACCTT 244433 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || | | |||||||| | | | ||| | |||| || || || Sbjct 244434 TCCAAGGATCTCCACGACTGGGACAACAAGCTCAACGA-CAACGAACGCCACTTTATCTC 244492 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| |||||||| |||||||||||||| ||||| | | || || Sbjct 244493 GCACGTCCTCGCCTTCTTCGCCGCTTCCGACGGTATCGTCAACGAGAACCTCGTCGAGCG 244552 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 |||| || | |||||||||| | ||||| ||||| |||||||| |||||||| | Sbjct 244553 TTTCAGCTC-CGAGGTGCAAGCCGCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 244611 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| |||||||||||| ||| | |||||||| || ||||| | |||| | Sbjct 244612 TGGAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACCTACATTCGCGAGCCCG 244671 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | | || || | | || | ||| ||||||| || || | || |||| |||||| | Sbjct 244672 AGCAGCGCGAGCTCCTCTTTGACGCCGTCGAGACCATCCCCGTCGTCAAGCAGAAAGCCG 244731 Query 61442 ATTGGGC-CTTCAATTGGATCACCAGTACAA-CG-GCTACATTTGGTGAACGATTGCTGG 61498 | ||||| || | | ||||||| | |||| || || || || | || || | | | Sbjct 244732 ACTGGGCGCTGCGA-TGGATCAGC--GACAAGCGCGCCACTTTCGCCGAGCGTCTCGTCG 244788 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | ||||| | || || || | || ||| || || || ||| | ||||| ||| | | Sbjct 244789 CCTTTGCCGCCGTTGAAGGCATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTCA 244848 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 |||| || || || ||||||||||| |||||| ||| ||| | || || |||||||| | Sbjct 244849 AGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAAG 244908 Query 61619 GCATGCA 61625 | |||| Sbjct 244909 GTCTGCA 244915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567869175280