Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq29 190 6e-46 seq37 158 4e-36 >seq29 Length=208081 Score = 190 bits (210), Expect = 6e-46 Identities = 146/173 (84%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 109 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168 || |||||| |||||||||||||||||| | || ||| ||| ||||||| | ||| || Sbjct 51909 GTTGTAGCCATTTCTCAGGCTCCCTCTCTAGGATTGAATCCTTATTCCCCATGTCCCATT 51968 Query 169 GATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAA 228 || ||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| Sbjct 51969 GAAACCATGGTAGGCCTATATCCTACCATCAAAAGTTGATAGGGCAGATATTTGAATGAA 52028 Query 229 CCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG 281 |||| | || |||| |||||| |||| |||||||||||||||||||||| Sbjct 52029 GCATCACTGGTACAAGACCATGCAATTCAAGAAGTTATTATGAATCACCAAGG 52081 >seq37 Length=152643 Score = 158 bits (174), Expect = 4e-36 Identities = 111/127 (87%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156 |||| ||||||||||||||| ||||||||||||||||| | ||||| ||||||| ||||| Sbjct 105534 CCTTTCTTGGATGTGGTAGCTGTTTCTCAGGCTCCCTCGCTGGAATTGAACCCTTATTCC 105475 Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 || ||||| ||||| ||||||||||||| ||| |||| || |||||||||||||||| | Sbjct 105474 CCATTACCTGTTGAAACCATGGTAGGCCTTTATTCTACTATTGAAAGTTGATAGGGCATA 105415 Query 217 AATTTGA 223 |||||| Sbjct 105414 TATTTGA 105408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510364732160