Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq120 179 3e-40 seq654 122 7e-23 >seq120 Length=370717 Score = 179 bits (198), Expect = 3e-40 Identities = 299/427 (70%), Gaps = 4/427 (1%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || |||||||| ||||| ||||| || || |||||||| | | ||||| ||| | ||| Sbjct 289344 GCATTCTTTGCTGCTTCCGACGGCATTGTGAATGAGAACCTCCTTGAACGATTCTC-CAG 289402 Query 61273 -GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGT 61331 || | || || | || || || || |||||||||||||| || ||||| ||||| Sbjct 289403 TGAAATTCAGGTAGCTGAAGCACGGTGCTTCTACGGCTTCCAAATAATGATGGAAAATGT 289462 Query 61332 CCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGA 61391 |||||||| | ||| | | || ||||| || ||||||| ||| | | ||||| | Sbjct 289463 TCACTCGGAAACTTACTCTCTACTTATCGACACCTACATCAAGGATCCAGAAGAACGGAA 289522 Query 61392 ACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTT 61451 || | ||| | |||||||| || || | || ||||| ||||| || ||||| | Sbjct 289523 ACATCTATTCGACGCCATCGAAACCATCTCATGTGTCAAGCGTAAAGCTGACTGGGCTCT 289582 Query 61452 CAATTGGATCACCAGTACAAC-GGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 | ||||| | ||| |||| | | || |||| |||||| | | || ||||| | | Sbjct 289583 TAGATGGAT-ATCAGACCAACAGTCCACCTTTGCGGAACGACTTGTTGCTTTTGCCGCTG 289641 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 | || || |||||||| ||| || ||||| || || |||||| | ||||| ||||| Sbjct 289642 TAGAAGGAATATTTTTCTCTGGGTCCTTTGCTGCTATTTTTTGGATCAAGAAGCGTGGTT 289701 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||| ||||| || ||| |||||| | || |||||||| ||| | || | Sbjct 289702 TGATGCCTGGTCTCACTTTCTCCAATGAACTCATCAGTCGCGACGAAGGCCTTCACACGG 289761 Query 61631 ATTTTGC 61637 ||||||| Sbjct 289762 ATTTTGC 289768 Score = 165 bits (182), Expect = 6e-36 Identities = 369/546 (68%), Gaps = 11/546 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| ||||| ||||||||||||| |||||| | ||| | Sbjct 288107 ATATGGCAAATGTACAAAAAGGCAGAAGCATCCTTCTGGACGGCTGAGGAGATGGATCTT 288048 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| ||| | | || ||| || || | | || | ||| | || || || Sbjct 288047 TCCAAGGACCTTTACGATTGGAATGAACGCCTCAATGA-CAATGAGCGCCACTTTATCTC 287989 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || ||||| || ||||| ||||| || || || ||||| || || | | || || Sbjct 287988 GCACGTTTTGGCTTTTTTTGCTGCTTCCGATGGCATTGTCAACGAAAACCTTGTCGAGCG 287929 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | | || || || | | || || || |||||||| ||||| ||||| || Sbjct 287928 CTTCTCCAATGAAGTCCAGGCAGCTGAAGCTCGCTGTTTCTATGGCTTTCAGATCATGAT 287869 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || | || || || | || | | || || || || ||||||| ||| | || Sbjct 287868 GGAAAACATTCATTCCGAAACATATTCTCTCCTTATAGACACTTACATCAAGGACCAAGC 287809 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 || || || | || |||||||||| || || || | || ||||| || || Sbjct 287808 TGAGCGCGAGTACCTCTTTGATGCCATCGAAACCATTCCCTGTATTAAACGGAAGGCTGA 287749 Query 61443 TTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501 ||||| | || |||||| | | | ||| |||| || | ||||| || | |||| Sbjct 287748 ATGGGCTCTGAAGTGGATCTCTGACAAGAACT-CTACTTTCGCCGAACGGTTAGTTGCAT 287690 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 |||||| || || || | || ||| || || ||||| ||||||| ||| | |||| Sbjct 287689 TTGCGGCTGTGGAAGGCATCTTCTTCTCAGGCTCCTTTGCATCAATCTTCTGGCTAAAGA 287630 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA--CGCGACGAGGG 61619 ||||||| || |||||||| |||| ||| || ||| | ||||| || || ||||| Sbjct 287629 AACGTGGTCTCATGCCCGGCTTGACTTTCTCAAACGAGCT--TATCAGCCGTGATGAGGG 287572 Query 61620 CATGCA 61625 ||||| Sbjct 287571 TATGCA 287566 Score = 89.7 bits (98), Expect = 4e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || ||| | || ||| |||||| |||||||| | | |||||| ||||| ||||| Sbjct 287400 GATGCTCTCCCTGTCAAACTCATAGGCATGAACTCGGACCTAATGCGCCAGTACATTGAG 287341 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 ||||| || || ||| | | || | | |||| | | |||| || | || || Sbjct 287340 TTTGTGGCTGATCGTTTACTCGTGGCCCTCGGTAACGACAAGGTCTACAACAAGACCAAT 287281 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 |||||||| ||||||||||||||||| | | ||||||||||| || || ||||| || Sbjct 287280 CCATTTGACTTCATGGACATGATTTCATTACAAGGCAAGACGAACTTCTTTGAGAAGCGG 287221 Query 61918 GT 61919 || Sbjct 287220 GT 287219 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/169 (72%), Gaps = 10/169 (6%) Strand=Plus/Plus Query 61756 CTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 ||||| ||||||||| | ||| |||| ||||||||||||||||| || || || || Sbjct 289940 CTCATTGGCATGAATGCTATACTCATGTGCCAGTATATTGAATTTGTCGCAGATCGACTT 289999 Query 61816 TTGGTCGATTTGGGTATGAAGCGGATCTATAATA-----CGAAAAACCCATTTGATTTCA 61870 | |||| | ||| ||| | ||| ||| || || ||||||| || ||||| | Sbjct 290000 CTTGTCGCTCTGG----GAAAC-GATAAATATTACGGTTCGCAAAACCCCTTCGATTTTA 290054 Query 61871 TGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||| |||||||| || | || ||||| || || || || || || || Sbjct 290055 TGGATATGATTTCTATGCAAGGAAAGACCAACTTCTTTGAAAAGCGGGT 290103 >seq654 Length=437428 Score = 122 bits (134), Expect = 7e-23 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || |||||||| | ||| ||||| ||||| ||||| || || || || || | ||| Sbjct 47871 AAAAGATCAGGCACCCAAAGGGCATAGAAAAGATCTCGCGCACGGACTTCTTCCTTTCCG 47930 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || || | ||| || |||||||| |||| |||||||||||| ||||| | |||||| Sbjct 47931 TGGTTCTTTCTCAAATCAAGGAACTCGAAGACGTCGGCATGCCAGGGTTCGATGTAGATC 47990 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 ||||| | ||| || ||| ||| |||||||||||||| ||||| Sbjct 47991 GCGAAAGCACCCGGTCGCTTGTTGCCTCCTTGGTCGACGTAACGAGC 48037 Score = 95.1 bits (104), Expect = 1e-14 Identities = 178/259 (69%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 66665 ATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTG 66724 || || ||||| || ||| |||| ||| | ||| | || || || ||||| || | Sbjct 48242 ATACCATCAATTGAATCATCCTTCATGCAAACAAGGAAACACGAGCTGAGTTGTGGATGA 48301 Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784 ||||| | || |||||| || || | |||||| || ||||| | |||||| | Sbjct 48302 GGTGTACCAGCATTGAAGAGAGTAGGCGAAGCGTGTGTGAAGTAGCGCTCAGACATCAGA 48361 Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCAT 66843 || |||||||| | |||| ||||||| ||||||||||| || | ||| ||| ||||| Sbjct 48362 TTATACGTCTCTAAGACACGTTCAATGTCATCGCCATGAATGCCAACTGCGACA-CGCAT 48420 Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTC 66903 | | | |||||| || || | | || | | |||| | | | ||| || || || Sbjct 48421 GATCATATGTTGAGGGCGCTCAGCGACGCGTCCGTCGATACGGAGAAGGTATGAACGCTC 48480 Query 66904 CAGGGTCTTGATACCAAAG 66922 ||| ||||||| |||||| Sbjct 48481 CAGCGTCTTGAAGCCAAAG 48499 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 |||| || || |||||||| || || | ||| || ||||| ||||||| || || || Sbjct 47247 AAAGCATCAGCGAGACCTTGCACACCGACACCAATAGGACGGTGACGCATGTTCGAGCGA 47306 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTG 65917 | || || || |||||||| ||||||| ||| || || |||||||||||| Sbjct 47307 CGGGCTTCGGGGACAGGGTAATAATTGACATCAATGATACGATTCAAATTG 47357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397556686084400