Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq497 131 9e-29 seq372 116 2e-24 seq3 96.9 2e-18 >seq497 Length=27384 Score = 131 bits (144), Expect = 9e-29 Identities = 99/116 (85%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA--ATGATAACATCGC 58 |||||||||||||||||||||||||||||||| || ||| || || | | |||| Sbjct 27037 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCTGAACGACACATTTTATATTGAGTTCGC 26978 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 || |||||||||||||||||||||| ||||||||||| ||||||||||||||| || Sbjct 26977 CCAATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTT 26922 >seq372 Length=16318 Score = 116 bits (128), Expect = 2e-24 Identities = 96/116 (83%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA--ATGATAACATCGC 58 |||||||||||||||||||||| ||||||||| || | | || || | | | || Sbjct 8328 GAACCCAAAGACTTTGATTTCTTGTAAGGTGCTGAACAACACATTTTATATTGAGTTTGC 8387 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 || |||||||||||||||||||||| ||||||||||| ||||||||||||||| || Sbjct 8388 CCAATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTT 8443 >seq3 Length=1746238 Score = 96.9 bits (106), Expect = 2e-18 Identities = 93/119 (78%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA--ATGATAACATCGC 58 ||||| |||||||||||||| | ||||||||| |||| | || || | | | || Sbjct 1146730 GAACCTAAAGACTTTGATTTGTTGTAAGGTGCTGAGCAACACATTTTATATTGAGTTTGC 1146789 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||||||||| ||||||||||| ||||||||||| || |||||| ||| | || || Sbjct 1146790 CCAATCCCTAGTCAGCATAGTTTACTGTTAAGACTACAACAGTATCTRATCATTTTTGA 1146848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278395427280