Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq372 170 4e-40 seq3 102 1e-19 seq38 89.7 9e-16 >seq372 Length=16318 Score = 170 bits (188), Expect = 4e-40 Identities = 132/156 (85%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 163 TGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAA 222 ||||||||||||| ||||||||||||||||||||||||| ||||| | ||||| | Sbjct 16318 TGTTGGTTTCTAGAGTCGCCGTAATGATTAATAGGGATAGTTGGGGGCATTGGTATTGAG 16259 Query 223 TTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAA 282 ||| |||||||||||||||||||| | | |||||| |||| ||| ||||| || |||| Sbjct 16258 TTGCTAGAGGTGAAATTCTTGGATTGACTCAAGACTGACTATTGCAAAAGCATTTGCCAA 16199 Query 283 GGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||| ||||||| |||||||| Sbjct 16198 GGATGTTTTCATTAATCA-AGAACGAAGGTTAGGGG 16164 >seq3 Length=1746238 Score = 102 bits (112), Expect = 1e-19 Identities = 78/91 (86%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 |||||||||||||||||||| | | ||||| |||| ||||||||| || ||||||||| Sbjct 1146939 AGAGGTGAAATTCTTGGATTGACTCAAGACCGACTATTGCGAAAGCATTTGCCAAGGATG 1146880 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||| |||| || |||||||| Sbjct 1146879 TTTTCATTAATCA-AGAACAAAGGTTAGGGG 1146850 >seq38 Length=508478 Score = 89.7 bits (98), Expect = 9e-16 Identities = 75/91 (82%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 |||||| ||||||||||||| | | |||||| |||| ||| ||||| || | ||||||| Sbjct 183907 AGAGGTTAAATTCTTGGATTGACTCAAGACTGACTATTGCAAAAGCATTTGCTAAGGATG 183848 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||| |||| || ||||||| Sbjct 183847 TTTTCATTAATCA-AGAACAAAGTTTAGGGG 183818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915183965696