Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq127 370 4e-100 seq5 192 2e-46 >seq127 Length=169058 Score = 370 bits (410), Expect = 4e-100 Identities = 491/670 (73%), Gaps = 31/670 (5%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||||||||||| |||||||| | ||||||||| ||| Sbjct 36736 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGTGGTAAATTCCATCTAAAGCTGAAT 36677 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| ||||||| |||| | ||||||| ||| ||||||||||||| ||||||||| Sbjct 36676 AATGGCAAGAGACCAATAGTGAACAAGTACCATGAGGGAAAGATGAAAAGAACTTTGGAA 36617 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 |||| |||||| || ||||||||||| |||||||||| ||||| | ||| || Sbjct 36616 AGAGGGTTAAACAGTACGTGAAATTGCTGAAAGGGAAATGCTTGAAGTCAGTTGTGTTGA 36557 Query 220 CAGTTGCTCAAC-CGGCCCCTCGGCC-GGTGCACTCTTCTGCGGTCAGGCCAGCATCAGC 277 | | | | || | || | || ||| ||||| | | | | ||||||||| Sbjct 36556 CTGGGGTTAAATTCTGCTTATAAGCATGGTTTACTCTCCAGTTGATGAGTCAGCATCAGT 36497 Query 278 TCGGGCGGTC---GGATAAAGGCCCC-GGGAATGTGGCCCCCTTCGGGGGGTGTT-ATAG 332 | | || |||||||||| | ||||||||||| | || ||| || || |||| Sbjct 36496 TTTAAC--TCAATGGATAAAGGCTCAAGGGAATGTGGCATC--TCTGGGTGTATTTATAG 36441 Query 333 CCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCC----GC--GCT--------CCGGC 378 ||| ||| || | | ||||||||| | || ||| | || Sbjct 36440 CCCTTGGTCATATACATTG-GTTGGGACTGAGGAACTTGGGCAAGCTTTTTATTGCTTGC 36382 Query 379 T---AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | |||||||| || |||||| | ||||| | |||||| ||||| ||||||| |||| Sbjct 36381 TTATAGGATGCTAGCATAATGGCTTTAAGCAATCTGTCTTGAAACACAGACCAAGAAGTC 36322 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||||| || ||| |||| ||| |||| | |||||||||||||||||| ||| | Sbjct 36321 TAACATGCCTGTAAGTATTTGAGTGGAAAACTCAAGCGCGTAATGAAAGTGAATAGAGTT 36262 Query 496 GGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGG--ATGGATTTGAGTA 553 | || ||| | |||| ||| || | || || || | || | |||||| || | Sbjct 36261 GAGATCCCCTTAGGGAGCATCAATGCCCAGACCAGAGCTTTTTAGCAATGGATCTGTGGT 36202 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 36201 TGAGCATATATGTTGGGACCTAAAAGATAGTGAACTATGCCTGAATAGGGTGAAGCCAGA 36142 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||||| | ||| ||||| |||||||| || ||||||||||||| Sbjct 36141 GGAAACTCTGGTGGAGGCTTGTAGCAATTCTGATATGCAAATCAATTGTCAAATTTGGGT 36082 Query 674 ATAGGGGCGA 683 ||||||| || Sbjct 36081 ATAGGGGTGA 36072 >seq5 Length=1496287 Score = 192 bits (212), Expect = 2e-46 Identities = 141/164 (86%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||| |||||||||||||||||||||||||||| |||||||| | ||||||||||||| Sbjct 1405349 GAGTCAAGTTGTTTGGGAATGCAGCTCTAAATGGATGGTAAATTCCATCTAAAGCTAAAT 1405290 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| |||||||||||| | ||||||| |||| ||||||||||||| ||||||||| Sbjct 1405289 AATGGCAAGAGACCGATAGTGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGGAA 1405230 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||| |||||| || | | |||||| |||||||||| | |||| Sbjct 1405229 AGAGGGTTAAACAGTATGCAAAATTGCTGAAAGGGAAACACTTG 1405186 Score = 77.0 bits (84), Expect = 1e-11 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 541 ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 |||||| || | |||| | ||||||||||||||||||||||||||||||||||||| Sbjct 1404569 ATGGATCTGCGGTTGAGCGTGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 1404510 Query 601 GGGTGAA 607 | ||||| Sbjct 1404509 GTGTGAA 1404503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079962419600