Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq127 399 4e-109 seq5 250 4e-64 seq47 230 4e-58 >seq127 Length=169058 Score = 399 bits (442), Expect = 4e-109 Identities = 247/264 (94%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||| ||||||||||||||||||||||||| || |||||||||||||||| ||||||||| Sbjct 32586 CATTAGTAGGGTAAAACTAACCTGTCTCACAACAGTCTAAACCCAGCTCATGTTCCCTAT 32645 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||| || Sbjct 32646 TAGTGGGTGAACAATCCAATGCTTACCAAATTCTGCTTTGGTATGATAGGAAGAGCCAAC 32705 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || |||||||||||||| ||| | |||||||||||||||||||||||||||||||||||| Sbjct 32706 ATTGAAGGATCAAAAAGAAACATTGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 32765 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||| Sbjct 32766 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCAAGGGACTAAAGGATCAATAGGC 32825 Query 272 CACACTTTCATGGTTTGTATTCAC 295 || ||||||||||||||||||||| Sbjct 32826 CATACTTTCATGGTTTGTATTCAC 32849 >seq5 Length=1496287 Score = 250 bits (276), Expect = 4e-64 Identities = 201/251 (80%), Gaps = 30/251 (12%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||||||| |||||||||||||||||| | ||||||||||||||||| ||| ||||| Sbjct 1402431 CATCAGTAGGATAAAACTAACCTGTCTCACAATGGTCTAAACCCAGCTCATGTTTCCTAT 1402490 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 ||| ||||||||||||||| ||||||| ||||||||||| Sbjct 1402491 TAGCGGGTGAACAATCCAATGCTTACCAAATTCTGCTTCA-------------------- 1402530 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||||||||| | ||||| ||| |||||||||||||||||||||||||| Sbjct 1402531 ----------CAAAAAGCAACATTGCTATAAACACTTGGCTGCCACAAGCCAGTTATCCC 1402580 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||| |||||||||||||| ||||||||| ||||| | |||||||||||||| ||||||| Sbjct 1402581 TGTGATAACTTTTCTGGCATCTCTAGCCTTAAATTCCAAGGGACTAAAGGATTGATAGGC 1402640 Query 272 CACACTTTCAT 282 ||||||||||| Sbjct 1402641 CACACTTTCAT 1402651 >seq47 Length=644074 Score = 230 bits (254), Expect = 4e-58 Identities = 145/157 (92%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||||||| ||||| |||||||||||||||| || |||||||| ||||||||||||| Sbjct 631059 TAGGAAGAGCCAACATCAAAGGATCAAAAAGCAATGTTGCTATGAATGCTTGGCTGCCAC 631000 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTA 257 ||||||||||||||| |||||||||||||||||||||| ||||||||| | |||||||| Sbjct 630999 AAGCCAGTTATCCCTATGGTAACTTTTCTGGCACCTCTGACCTCAAATTCCAAGGGACTA 630940 Query 258 AAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||| || |||||||||||||||||||||||||||||| Sbjct 630939 AAGCATTGATAGGCCACACTTTCATGGTTTGTATTCA 630903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854385030912