Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq372 260 3e-67 seq497 159 7e-37 seq3 145 1e-32 >seq372 Length=16318 Score = 260 bits (288), Expect = 3e-67 Identities = 180/200 (90%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||| |||| ||| | ||||| |||||||||| Sbjct 8183 GAACGAGACCTTAACCTGCTAAATAGCTAGGCTGGCTCATACTAGTCGC-GGCTTCTTAG 8125 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 8124 AGGGACTGTCAGCATCCAGCTGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 8065 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA-TCACCTTGGC 197 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct 8064 AGATGTTCTGGGCCGCACGCGCGCTACAATGACAGAGCCAGCGAGTTCATTCACCTTGGC 8005 Query 198 CGGAAGGTCTGGGTAATCTT 217 || ||||||||||||||||| Sbjct 8004 CGTAAGGTCTGGGTAATCTT 7985 >seq497 Length=27384 Score = 159 bits (176), Expect = 7e-37 Identities = 115/130 (88%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||||||||||||| |||| ||| || ||||| |||||||||| Sbjct 27256 GAACGAGACCTTAACCTGCTAAATAGCTAGGCTGGCTCATGCTAGTCGC-GGCTTCTTAG 27314 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || || || ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 27315 AGGGACTGTCAGCATCCAGCTGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 27374 Query 139 AGATGTTCTG 148 |||||||||| Sbjct 27375 AGATGTTCTG 27384 >seq3 Length=1746238 Score = 145 bits (160), Expect = 1e-32 Identities = 145/185 (78%), Gaps = 11/185 (6%) Strand=Plus/Minus Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGA 84 ||||||||||||||||||||||||||| ||| || ||| || | ||||||||||||| Sbjct 1146516 AGACCTTAACCTGCTAAATAGCCAGGCTGGCTAATGCTGGTTGCAG-CTTCTTAGAGGGA 1146458 Query 85 CTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATG 143 || || || | ||| ||| ||||||||||||||||||||||| ||||||| ||| Sbjct 1146457 CTGTCAGCATTCAGCTGATTGAAGTTTGAGGCAATAACAGGTCAGTGATGCTCTT----- 1146403 Query 144 TTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG-TTCATCACCTTGGCCGGAA 202 ||||| ||| || ||||| ||||||||||| ||| | |||||||||| | || Sbjct 1146402 ---TGGGCTGCATATGCACTACAATGACAGAGCCAGTGAGCTATTTCACCTTGGCTGTAA 1146346 Query 203 GGTCT 207 ||||| Sbjct 1146345 GGTCT 1146341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947183405056