Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq47 601 1e-169 seq127 600 4e-169 seq5 540 3e-151 seq331 379 7e-103 seq14 176 1e-41 seq64 109 2e-21 >seq47 Length=644074 Score = 601 bits (666), Expect = 1e-169 Identities = 461/541 (85%), Gaps = 4/541 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 630870 CTTTTGTTCTACTCAAGATTTCTGTTCTTGATGAGTCCCCCTTAGGACACCTGTGTTATC 630811 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 630810 TTTTTACAGATGTGCTGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCAGATC 630751 Query 127 GGCCCGCGAAGGAC-CTT-AACGCCAGAAAATG-GTCGGTGAAGACCAGTTCCGCTTCAT 183 ||| || || ||| || |||| || ||| | | | || |||| ||| | |||| Sbjct 630750 AGCCTCTTAAAGAGGCTTCAAAGCCAAAACATGAGACTATTAATCCCAGCTCCACCTCAT 630691 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG-AAACGGCTCCCA 242 ||| ||||||||| || ||| |||| |||||||||| | ||| ||| ||||| | Sbjct 630690 TGAACAAGTAAAAAGACAATAGAGGTAATGGTATTTCAATGTTGCCTTAAATAGCTCCTA 630631 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||| Sbjct 630630 CTTATTCTACACCCCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 630571 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 |||| ||||| |||||||| | |||||| |||||||||||||||||| ||||||||||| Sbjct 630570 CTTCATTCCCTGCTGATTCTCCAAAGCCCATTCCCTTGGCTGTGGTTTTGCTAGATAGTA 630511 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||| Sbjct 630510 GATAGGGACAGTGGGAATCTTGTTAATCCATTCATGCATGTCACTAATTAGATGATGAGG 630451 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||| |||||||||||||||||||||||||||| | |||||||| |||||||||||| Sbjct 630450 CATTTAGCTACCTTAAGAGAGTCATAGTTACTCCTGTGGTTTACCCATGCTTGGTTGAAT 630391 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 |||||||||||||||||||||||||||| || ||||||||||| ||||||| |||||||| Sbjct 630390 TTCTTCACTTTGACATTCAGAGCACTGGACAAAAATCACATTGTGTCAACACCACTTTCT 630331 Query 543 G 543 | Sbjct 630330 G 630330 >seq127 Length=169058 Score = 600 bits (664), Expect = 4e-169 Identities = 451/526 (86%), Gaps = 3/526 (1%) Strand=Plus/Plus Query 21 GAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTG 80 |||||||||||||| |||||||||||||||||||| | |||| ||| ||||||||| Sbjct 32889 GAGATTTCTGTTCTTGATGAGTCCCCCTTAGGACACTCACATTATCTTTTGACAGATGTG 32948 Query 81 CCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCC-CGCGAAG-G 138 | ||||||||||||||||||||||||||||||| ||||||| |||| ||| | ||| | Sbjct 32949 CTGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCAGATCAGCCTCTTAAAGAG 33008 Query 139 ACCTTAACGCCAGAAAATGGT-CGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaa 197 || |||| |||| || |||| | | || |||| || || ||||||| |||||||||| Sbjct 33009 ACTTTAAAGCCAAAACATGGGACTATTAATCCCAGCTCTGCCTCATTGAATAAGTAAAAA 33068 Query 198 aaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTC 257 ||| ||| ||||||||||||||| ||| || ||||||||||||||||||||| | Sbjct 33069 AACAATAGAGGTAGTGGTATTTCAACGTTGCCTTAATGGCTCCCACTTATTCTACACCCC 33128 Query 258 TCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTG 317 | ||| |||||||| ||| ||||||||||||||||||||||||||||||||| |||| Sbjct 33129 CTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCTGCTG 33188 Query 318 ATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGG 377 |||| |||||||| ||||||||||||||| ||| ||||||||||||||||||| || | Sbjct 33189 ATTCTGCCAAGCCTGTTCCCTTGGCTGTGATTTTGCTAGATAGTAGATAGGGATGGTAGA 33248 Query 378 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 437 ||||| ||||||| |||||||| ||||||||||||||||| || ||||||||||||||| Sbjct 33249 AATCTTGTTAATCTATTCATGCATGTCACTAATTAGATGACAAGACATTTGGCTACCTTA 33308 Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33309 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 33368 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 || |||||||| ||||||||||| || | |||||| |||||||| Sbjct 33369 TTGAGAGCACTTAGCAGAAATCACCTTCCATCAACACTACTTTCTG 33414 >seq5 Length=1496287 Score = 540 bits (598), Expect = 3e-151 Identities = 450/544 (83%), Gaps = 16/544 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||| ||||||||| |||||||||||||| |||| Sbjct 1402692 CTTTTGTTCTACTCAAGATTTCTGTTCTTGATGAGTCCCTCTTAGGACACCTGCATTATT 1402751 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAA-CTCCCCACCTGACAATGTCATCAACCCGGAT 125 |||||||||||||| |||| ||||||| ||||| || |||||||||| |||||| ||| Sbjct 1402752 TTTTAACAGATGTGCTGCCCTAGCCAAAACTCCCTACTTGACAATGTCTTCAACCTAGAT 1402811 Query 126 CGGCC-CGCGAAG-GACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCC--GCTTC 181 | ||| | ||| ||| |||| |||| || || ||||| | ||| || || Sbjct 1402812 CAGCCTCTTAAAGAGACTTTAAAGCCAAAACAT--------AAGACTATTTCTCTGCCTC 1402863 Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGAAACGGCTC 239 |||| |||||||||| || ||| ||||||||||||||| |||| ||| ||||| Sbjct 1402864 -TTGAATAAGTAAAAAGACAATAGAGGTAGTGGTATTTCAAAGTTGCCTTAAAATGGCTC 1402922 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 |||||||||||| ||||| | ||| |||||||| ||| |||||||| ||||||||||| Sbjct 1402923 CCACTTATTCTATACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTTAAGCTCAACAG 1402982 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 ||||||||||||| ||| |||| ||||||||| |||||||||||||||||| ||| |||| Sbjct 1402983 GGTCTTCTTTCCCTGCTAATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTTGCTGGATA 1403042 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 ||||||||||||||||||||||| ||||||| |||||||| || | ||||||||| Sbjct 1403043 GTAGATAGGGACAGTGGGAATCTTGTTAATCTATTCATGCATGTTGCCAATTAGATGCTA 1403102 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 ||||||||||||| |||||||||||||||||| |||| || |||||| | ||||||| | Sbjct 1403103 AGGCATTTGGCTATCTTAAGAGAGTCATAGTTTCTCCTGCTATTTACCTGTGCTTGGTGG 1403162 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTT 539 |||||||| ||||||||||| |||||||||| |||||||||||||| ||||||| ||||| Sbjct 1403163 AATTTCTTTACTTTGACATTTAGAGCACTGGACAGAAATCACATTGTGTCAACACCACTT 1403222 Query 540 TCTG 543 |||| Sbjct 1403223 TCTG 1403226 >seq331 Length=83472 Score = 379 bits (420), Expect = 7e-103 Identities = 260/294 (88%), Gaps = 6/294 (2%) Strand=Plus/Minus Query 232 AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAG 291 || ||||||||||||||||||||| | | || |||||||| ||| |||||||||||| Sbjct 58737 AATGGCTCCCACTTATTCTACACCCCCTATRTCTTTTCACAATGTCAAACTAGAGTCAAG 58678 Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 ||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| Sbjct 58677 CTCAACAGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTT 58618 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 ||||||||||||| ||||||||||||| ||||||||||||| || ||||||||| Sbjct 58617 GCTAGATAGTAGA------CAGTGGGAATCTCATTAATCCATTCATATGCATCACTAATT 58564 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 |||||| ||||||||||||||||| ||||||||||||||||||| || ||||| || | Sbjct 58563 GGATGACAAGGCATTTGGCTACCTTGAGAGAGTCATAGTTACTCCTGCTGTTTAACCATG 58504 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 58503 CTTAGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGGAATCACATTG 58450 >seq14 Length=912124 Score = 176 bits (194), Expect = 1e-41 Identities = 123/140 (88%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 287 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346 |||||||||||||||||||||||||| |||||||| ||||||||| || ||||||||| Sbjct 749579 TCAAGCTCAACAGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCCATTTTCTTGGCTGTA 749520 Query 347 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406 ||||| ||||||||||||||| |||||||||||||| ||||||| |||||| | || || Sbjct 749519 GTTTCACTAGATAGTAGATAGAGACAGTGGGAATCTTGTTAATCTATTCATACATGTTAC 749460 Query 407 TAATTAGATGACGAGGCATT 426 | ||||||||| ||||| || Sbjct 749459 TGATTAGATGATGAGGCTTT 749440 >seq64 Length=296259 Score = 109 bits (120), Expect = 2e-21 Identities = 101/127 (80%), Gaps = 5/127 (4%) Strand=Plus/Plus Query 199 aCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCT 258 || ||| ||||||||||||||| | | || ||||||||||||||||||||| Sbjct 53234 ACAATAGAGGTAGTGGTATTTCAACATTGTCTTAA-GGCTCCCACTTATTCTACACCCYC 53292 Query 259 CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC----AACAGGGTCTTCTTTCCCCG 314 | ||| |||||||| ||| ||||||||||||||| |||||||||||||||||| | Sbjct 53293 TATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCACTYAACAGGGTCTTCTTTCCCTG 53352 Query 315 CTGATTC 321 ||||||| Sbjct 53353 CTGATTC 53359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635171351296