Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq5 134 2e-29 seq127 116 6e-24 >seq5 Length=1496287 Score = 134 bits (148), Expect = 2e-29 Identities = 105/123 (85%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| ||||| || | |||| | Sbjct 1402401 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTATTTGCACCTGTCCGATCGGGCAAT 1402344 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||| |||||||||||||||||||||| |||||||||||||||||||| | | Sbjct 1402343 GGTGCGAAGCTATCATCTGCTGGATTATGGCTGAATGCCTCTAAGTCAGAATCCATACTA 1402284 Query 121 GAA 123 ||| Sbjct 1402283 GAA 1402281 >seq127 Length=169058 Score = 116 bits (128), Expect = 6e-24 Identities = 89/104 (86%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79 ||||||| |||||||| ||||| ||||| || | |||| || ||||||||| |||||| Sbjct 32538 ATTCAGA-TAATTGGTATTTGCACCTGTCCGATCGGGCAATGGTGCGAAGCTATCATCTG 32480 Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||||||||||| ||||||||||||||||||| | |||| Sbjct 32479 CTGGATTATGGCTGAATACCTCTAAGTCAGAATCCATACTAGAA 32436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819186096128