Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 205 7e-48 seq21 93.3 3e-14 >seq3 Length=1746238 Score = 205 bits (226), Expect = 7e-48 Identities = 380/548 (69%), Gaps = 15/548 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| ||||| ||||||||||||| |||||| | ||| | Sbjct 1247771 ATATGGCAGATGTACAAAAAGGCAGAAGCATCCTTCTGGACGGCCGAGGAGATGGATCTT 1247712 Query 61147 TCCAAAGACATGAATGACTGG---GAGCGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||||||||| | || ||| || || | | || | ||| | || || || Sbjct 1247711 TCCAAAGACATATACGATTGGAATGAACGCCTCAATGA-CAATGAGCGCCACTTTATCTC 1247653 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| ||||| || ||||| ||||| || || |||||||| || || | | ||||| Sbjct 1247652 GCATGTTTTGGCCTTTTTTGCTGCTTCCGATGGCATCGTCAACGAAAACCTTGTCGAACG 1247593 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 || | | || || || | | || || || || ||||| || || || || || Sbjct 1247592 CTTTTCCAACGAAGTTCAGGCCGCTGAAGCTCGCTGCTTCTATGGTTTTCAAATCATGAT 1247533 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || | || || || | |||| | | ||||| || || ||||||| ||| | || Sbjct 1247532 GGAAAACATTCATTCCGAAACGTACTCTCTCCTCATAGACACTTACATCAAGGACCAAGC 1247473 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 ||||| || | || ||||||||||||| || || | ||||| || || || Sbjct 1247472 TGAACGCGAGTATCTTTTTGATGCCATCGAGACCATCCCCTGTATCAAGCGTAAGGCTGA 1247413 Query 61443 TTGGGCCTTCAATTGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501 |||||| |||| ||||| | | | ||| ||||||| | ||||||||| | |||| Sbjct 1247412 ATGGGCCCTCAAGTGGATATCTGACAAGAAC-TCTACATTCGCCGAACGATTGGTCGCAT 1247354 Query 61502 TTGCGGTGGTCGAGGG--TGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 |||| | || || || | | |||||| || || ||||| ||||||||||| | || Sbjct 1247353 TTGCAGCTGTGGAAGGCATCTTCTTTTCA--GGCTCCTTTGCATCAATCTTTTGGCTCAA 1247296 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA--CGCGACGAG 61617 ||| ||||| || ||||| || | |||||| |||||| | ||||| || || ||| Sbjct 1247295 GAAGCGTGGTCTGATGCCTGGCTTAACCTTCTCAAATGAGCT--TATCAGTCGTGATGAG 1247238 Query 61618 GGCATGCA 61625 || ||||| Sbjct 1247237 GGTATGCA 1247230 Score = 192 bits (212), Expect = 5e-44 Identities = 316/453 (70%), Gaps = 2/453 (0%) Strand=Plus/Plus Query 61186 GAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAAT 61245 |||| | |||||||| || || | || || ||||| ||||| ||||| ||||| ||| Sbjct 1249022 GAACGATATTTCATTTCCCACGTCCTCGCATTTTTTGCTGCTTCCGACGGCATCGTGAAT 1249081 Query 61246 GAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTAC 61305 |||||| | | || | || | || | || | | ||||| ||||| |||||| Sbjct 1249082 GAGAATCTCCTTGAGAGGTTTTCTAGTGAAATACAGATAGCTGAGGCACGTTGCTTCTAC 1249141 Query 61306 GGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACG 61365 |||||||| ||| ||||| ||||| |||||||| | |||| | | || |||||||| Sbjct 1249142 GGCTTCCAAATTATGATGGAAAATGTTCACTCGGAAACGTACTCTTTACTTATCGATACC 1249201 Query 61366 TACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCG 61425 ||||||| ||| | | ||||| || | ||| | |||||||| || || | Sbjct 1249202 TACATCAAGGATCCAGAAGAACGCACACATCTTTTCGACGCCATCGAAACCATCTCATGT 1249261 Query 61426 GTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAAC-GGCTACATTTGG 61484 || ||||| ||||| |||||||| ||| ||||| | | | |||| | | || |||| Sbjct 1249262 GTTAAGCGTAAAGCTGATTGGGCTCTCAGATGGAT-ATCGGATCAACAGTCCACTTTTGC 1249320 Query 61485 TGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGC 61544 ||||||| | | || || || | || || || | |||||| ||| || ||||| || Sbjct 1249321 TGAACGACTCGTTGCTTTCGCCGCTGTAGAAGGGATCTTTTTCTCTGGGTCTTTTGCTGC 1249380 Query 61545 AATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGAT 61604 ||||| ||| | ||||| || ||| | ||||| ||||| || ||| |||||| | || Sbjct 1249381 TATCTTCTGGATCAAGAAGCGGGGATTAATGCCTGGTCTTACGTTCTCCAATGAACTCAT 1249440 Query 61605 ATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 |||||||||||| | || |||||||| Sbjct 1249441 CAGCCGCGACGAGGGCCTTCACACGGATTTTGC 1249473 Score = 104 bits (114), Expect = 2e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || ||| | || ||| |||||| |||||||| | | | ||| ||||| ||||| Sbjct 1247068 GATGCTCTTCCYGTCAAACTCATTGGCATGAACTCAGACTTGATGCGCCAGTACATTGAG 1247009 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTT-GGGTATGAAGCGGATCTATAATACGAAAAA 61856 |||||||| || ||||| | || | | ||| |||| || ||||||| | || ||| Sbjct 1247008 TTTGTTGCTGATCGTCTACTTGTGGCCCTCGGGAATGACAAGG-TCTATAACAAGACAAA 1246950 Query 61857 CCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACG 61916 || || || |||||||||||||||||||| | |||||||| || ||||| ||||| || Sbjct 1246949 TCCCTTCGACTTCATGGACATGATTTCGCTACAAGGCAAGACAAACTTTTTTGAGAAGCG 1246890 Query 61917 TGT 61919 || Sbjct 1246889 AGT 1246887 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 61756 CTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 ||||| ||||||||| | || |||| |||||||||||||||||||| || || || Sbjct 1249643 CTCATTGGCATGAATGCTACGCTCATGTGCCAGTATATTGAATTTGTTGCAGATCGACTT 1249702 Query 61816 TTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGAC 61875 | |||| | |||| | || ||| | || |||||| ||||||||||||||| Sbjct 1249703 CTTGTCGCTCTGGGAAACAATAAATACTACTGTTCGCCAAACCCCTTTGATTTCATGGAC 1249762 Query 61876 ATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTAT 61929 ||||| || || | || || || || || || || || || || ||||||| Sbjct 1249763 ATGATATCTATGCAAGGAAAAACCAACTTCTTTGAAAAGCGGGTTTCCGACTAT 1249816 >seq21 Length=1130388 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/228 (69%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || || ||||| | ||| ||||| || || ||||| || || || || || | || Sbjct 175086 AAGAGGTCAGGCACCCAAAGGGCATAAAAAAGATCTCGCGCACGAACTTCTTCCTTTCCA 175027 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || || | |||||| ||||| || |||| |||||| ||||| || || | |||||| Sbjct 175026 TGGTTCTTTCTCAAGTCAAGGAATTCGAAGACGTCGGCGTGCCAAGGCTCGATGTAGATC 174967 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC---GACATTGTTG 66520 || || | || || ||| || |||||||| ||||||||||| | ||| | Sbjct 174966 GCAAAGGCACCTGGTCGCTTGTTACCTCCTTGGTCAACGTAGCGAGCAGTGGCATCAT-- 174909 Query 66521 AAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 | | || | ||| ||||| | ||| || || | ||||||||| ||| Sbjct 174908 -ATGCTCGAAGCATGGGTACAATCCCATTCGAGTAGCCATTGGTACCG 174862 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 65813 TCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCC 65872 || || || ||||| || || ||||| || ||||| ||||||| |||||| | | || Sbjct 175701 TCAGCTAGGCCTTGCACACCGATACCAATAGGACGGTGACGCATGTTGGAAAGACGGGCT 175642 Query 65873 TCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTG 65917 || || || || ||||| |||| |||||||| |||||||||||| Sbjct 175641 TCGGGAACGGGATAGTAGTTGACGTCGATAATACGATTCAAATTG 175597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559510929280