Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2100 407 3e-111 >seq2100 Length=9021 Score = 407 bits (450), Expect = 3e-111 Identities = 277/309 (90%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 11 GGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAGCCAG 69 ||||||| ||| || ||| |||||| ||||| ||| |||||||||| |||||| |||| Sbjct 2556 GGCCGGGTCTTCTCTCTTGGTGATCCGGCATGCTCTTTACTGGGTGTGTCGGGGAACCAG 2615 Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 || |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| Sbjct 2616 GATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATATATTAGCA 2675 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2676 TGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGA 2735 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||||||| ||||| | |||||||| || ||||||||||||||||||||| Sbjct 2736 TTAATAGGGATAGTTGGGGGCATTAGTATTCACATGCTAGAGGTGAAATTCTTGGATTTT 2795 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 2796 GTGAAGACTAACTACTGCGAAAGCGTTTGCCAAGGATGTTTTCATTAATCA-AGAACGAA 2854 Query 310 AGTTAGGGG 318 |||||||| Sbjct 2855 GGTTAGGGG 2863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915173569024