Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq2379 95.1 3e-17 >seq2379 Length=12390 Score = 95.1 bits (104), Expect = 3e-17 Identities = 188/277 (68%), Gaps = 15/277 (5%) Strand=Plus/Minus Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69 || |||||| ||| || | ||||||||||||||| | ||||||||||| |||| | Sbjct 8783 ACCGCATCTGCACGGCTAATTCAATTTCACTGAGATACTTGTGGAGACAGCAGAGCCA-C 8725 Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 ||||| ||||| |||||| | | ||| | |||||||||| ||||| || || | Sbjct 8724 GTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTTGCTACTTTCAGATCC 8665 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCC 189 |||| |||| | ||||| || ||| | |||||||| | | ||| | Sbjct 8664 TTATAGTTAAGACCGCCATTCACCACAGTGTCGATCAA----------TGACATAAAATC 8615 Query 190 ATCAATT---AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT-TTCGTG 245 ||| || || | |||| ||||||| ||||| | ||||| ||| || Sbjct 8614 ATCTTTTTTATACTATGTGGCATCGGGCAGAGTTCACAACTTATACAAATACTAAATGTC 8555 Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 282 || ||| |||||||||||| |||||||||||||| Sbjct 8554 TTAGCAAGTTGCTGTGTTTTTGGTAAACAGTCGCAGC 8518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260763588096