Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2100 713 0.0 >seq2100 Length=9021 Score = 713 bits (790), Expect = 0.0 Identities = 468/508 (92%), Gaps = 9/508 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| Sbjct 2394 GTACTCATTCCAATTATAAGACTTTAAA-AGCCCTATATTGTTATTTATTGTCACTACCT 2336 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2335 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2276 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 2275 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 2216 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| Sbjct 2215 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 2156 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||| | |||||||||||| ||||||||| | |||||||| ||||| Sbjct 2155 CAAGGCCATGCGATTAGAAAAGTTATTATGATTCACCAAGG-GACCCGAAGG--GTTGG- 2100 Query 301 TTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357 ||||||||||||||||||||||||||| |||||||||| || | ||||||||||||||| Sbjct 2099 TTTTTATCTAATAAATACACCCCTTCCAAGAAGTCGGGGCTTGTAAGCATGTATTAGCTC 2040 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||| ||||||| ||||||||||||| || |||| ||||||||||| ||||||||||||| Sbjct 2039 TAGATTTACCACAGTTATCCATGTAGCAAAGTACCATCAAATAAACTATAACTGATTTAA 1980 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| Sbjct 1979 TGAGCCATTCGCAGTTTCACAGTATAAAGTTGCTTATACTTAGACATGCATGGCTTAATC 1920 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 1919 TTTGAGACAAGCATATGACTACTGGCAG 1892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510356379648