Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20caries_20[genbank_20GCA_5F001645005.1_202016-05-16] 2,888 sequences; 29,540,861 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2013 91.5 6e-13 >seq2013 Length=28712 Score = 91.5 bits (100), Expect = 6e-13 Identities = 217/323 (67%), Gaps = 10/323 (3%) Strand=Plus/Plus Query 88927 GGACCTTCATCATGGCCGATGCCGAGAGCCGCGGACGGGC---CGTGGCGCGCAAGTTCA 88983 |||| ||||||||| ||| ||| ||||| | ||| |||| |||||||| | Sbjct 23303 GGACGTTCATCATGCCCG--GCC-AGAGCGTGCGCCGGAAAAACGTGCGTCGCAAGTTGA 23359 Query 88984 CCGCCGTGGGCCGAGAGT--GCAGGGACAAGGCCGTGGTCGTGGTGGACGACTCTGTCGT 89041 ||| ||| | |||| || | || ||| |||| | | ||||||||||| | || Sbjct 23360 ACGCGATGGCTCTCGAGTTTGCCGAGAAAAG--CGTGTTGCTTGTGGACGACTCCATTGT 23417 Query 89042 GCGCGGCACCACATCCAAGTTCATAATCGACCTCCTTCGCAAGTCTGGCGCCACCAAGGT 89101 |||||| || || || ||| || || | | || | | || || |||||| Sbjct 23418 GCGCGGAACTACGTCGAAGGAGATCATTCAAATGGCGCGGGACGCCGGTGCACGCAAGGT 23477 Query 89102 CTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTGTACGGCATCGACATACC 89161 | | | ||||| || |||| |||||||| || |||||||||||||||||||||| || Sbjct 23478 CATCATGGCTTCCTGTGCTCCTCCGATCCGACACTCCAACGTGTACGGCATCGACATGCC 23537 Query 89162 GTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGCACGAGGTGGCTCTCCTCCTCGG 89221 ||| | || ||| |||| ||| || | |||| ||||||||| | || Sbjct 23538 CTCGCGGCACGAACTCGTTGCCCATGGCCGGAGCGAGTCCGAGGTGGCCAGTTACATCCA 23597 Query 89222 AGCCGACCAGGTCATCTATCAGA 89244 ||||||| |||||||| |||| Sbjct 23598 GGCCGACCTCGTCATCTACCAGA 23620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084660177960624