Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16]
3,586 sequences; 28,841,097 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2875 535 2e-149
>seq2875
Length=7473
Score = 535 bits (592), Expect = 2e-149
Identities = 532/681 (78%), Gaps = 41/681 (6%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||||
Sbjct 4436 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 4495
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||
Sbjct 4496 ATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 4555
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219
||||||||||| || |||||||||||| ||||||||||||||| |||| ||| |
Sbjct 4556 AGAGAGTTAAACAGTACGTGAAATTGTCAAAAGGGAAGCGCTTGAGGTTAGACATGCATG 4615
Query 220 CAGTTGCTCAACCGGCCCCTCGGCC--GGTGCACTCTTCTGCGGT-CAGGCCAGCATCAG 276
|||| |||||| | | || || | | | | ||| || |||||||||||| |
Sbjct 4616 CAGTAT-TCAACCTTTCTTTTGGGATTGGCGTATT-TGCTGTTGTGCAGGCCAGCATCGG 4673
Query 277 CTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCG 336
| | | | |||||| | | |||||||| | ||||| | |||||||| |
Sbjct 4674 TTTTGTCTGCTGGATAATAGTAGGAGAAATGTGGCATC-TTCGGATG-TGTTATAGTCTC 4731
Query 337 -----GG-----GTGGAAT-----GCGGCCCGCC-TGGACTG-AGGTCCGCGCTCCGGC- 378
|| ||||| | || |||| || | | | | | || || |||
Sbjct 4732 TTATTGGATACAGTGGACGAGACCGAGGACCGCAGTGTGCCGTAAGGCGGCTCTTCGGAG 4791
Query 379 -----------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACC 427
||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 4792 ACCTTCGCACTTAGGATGCTGGCGTAATGGCCTTAAGCGGCCCGTCTTGAAACACGGACC 4851
Query 428 AAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGA 487
|||||||||||||| | ||||||| |||||||| ||||||| | |||||||||||||||
Sbjct 4852 AAGGAGTCTAACATATTTGCGAGTCTTTGGGTGGCAAACCCATAGGCGTAATGAAAGTGA 4911
Query 488 ACGGAGGTGGGAACCCG-----TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGAT 542
| | |||||||| || || |||||||||||||||||||| || | | ||||
Sbjct 4912 ATGCAGGTGGGATCCTTCTTTATGGAGGTGCACCATCGACCGATCCGGAATTTCTAGGAT 4971
Query 543 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602
||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 4972 GGATTTGAGTACGAGCACATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 5031
Query 603 GTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662
| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||
Sbjct 5032 GCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGT 5091
Query 663 CAAATTTGGGTATAGGGGCGA 683
|||||||||||||||||||||
Sbjct 5092 CAAATTTGGGTATAGGGGCGA 5112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079923080300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |