Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 3e-17 >seq1 Length=113829 Score = 95.1 bits (104), Expect = 3e-17 Identities = 188/277 (68%), Gaps = 15/277 (5%) Strand=Plus/Plus Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69 || |||||| ||| || | ||||||||||||||| | ||||||||||| |||| | Sbjct 50673 ACCGCATCTGCACGGCTAATTCAATTTCACTGAGATACTTGTGGAGACAGCAGAGCCA-C 50731 Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 ||||| ||||| |||||| | | ||| | |||||||||| ||||| || || | Sbjct 50732 GTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTTGCTACTTTCAGATCC 50791 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCC 189 |||| |||| | ||||| || ||| | |||||||| | | ||| | Sbjct 50792 TTATAGTTAAGACCGCCATTCACCACAGTGTCGATCAA----------TGACATAAAATC 50841 Query 190 ATCAATT---AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT-TTCGTG 245 ||| || || | |||| ||||||| ||||| | ||||| ||| || Sbjct 50842 ATCTTTTTTATACTATGTGGCATCGGGCAGAGTTCACAACTTATACAAATACTAAATGTC 50901 Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 282 || ||| |||||||||||| |||||||||||||| Sbjct 50902 TTAGCAAGTTGCTGTGTTTTTGGTAAACAGTCGCAGC 50938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260754787712