Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16]
3,586 sequences; 28,841,097 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 3e-17
>seq1
Length=113829
Score = 95.1 bits (104), Expect = 3e-17
Identities = 188/277 (68%), Gaps = 15/277 (5%)
Strand=Plus/Plus
Query 10 ACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATC 69
|| |||||| ||| || | ||||||||||||||| | ||||||||||| |||| |
Sbjct 50673 ACCGCATCTGCACGGCTAATTCAATTTCACTGAGATACTTGTGGAGACAGCAGAGCCA-C 50731
Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129
||||| ||||| |||||| | | ||| | |||||||||| ||||| || || |
Sbjct 50732 GTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTTGCTACTTTCAGATCC 50791
Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCC 189
|||| |||| | ||||| || ||| | |||||||| | | ||| |
Sbjct 50792 TTATAGTTAAGACCGCCATTCACCACAGTGTCGATCAA----------TGACATAAAATC 50841
Query 190 ATCAATT---AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT-TTCGTG 245
||| || || | |||| ||||||| ||||| | ||||| ||| ||
Sbjct 50842 ATCTTTTTTATACTATGTGGCATCGGGCAGAGTTCACAACTTATACAAATACTAAATGTC 50901
Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 282
|| ||| |||||||||||| ||||||||||||||
Sbjct 50902 TTAGCAAGTTGCTGTGTTTTTGGTAAACAGTCGCAGC 50938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260754787712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |