Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq100 129 1e-27 >seq100 Length=8017 Score = 129 bits (142), Expect = 1e-27 Identities = 182/255 (71%), Gaps = 8/255 (3%) Strand=Plus/Plus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || ||||||||||||| | ||| ||| ||||| || |||||||| | || | || Sbjct 5797 TCTCCGTGGTTGCCCTGGTTATTGGCCAGACCGAAGAGACGCTCCTTCAACATGCGGTCC 5856 Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGC----ACCAACGTTGCGCCTTGTCACTGAACCC 165 ||||||| || |||| || | || || | ||| | ||||| || | || Sbjct 5857 TTGCCGTTCCAAAGCGCCAAGCTGAAGCCGAGACGACCGTGG----TTGTCGCTCAGACC 5912 Query 166 CGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTA 225 || || ||||| |||||||| ||| |||| || ||||| ||||| || || ||||||| Sbjct 5913 GGCGAGACCGTCTTCGCCCCAGCGGAAGGCACGACTGCGAGCATGCTCGTGCGGGAAGTG 5972 Query 226 GGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCT 285 || |||||| || || |||||| |||||| || || || ||| |||| || |||||| Sbjct 5973 GGACCAGGCATCACCGTCGGCGGAGTAGTCCTCCCGGACGGTGGCCCACTGACGTTCGGA 6032 Query 286 CAGGTAGGGGCCCCA 300 ||||| || ||||| Sbjct 6033 GAGGTACGGACCCCA 6047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007963853120