Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2875 434 2e-119 >seq2875 Length=7473 Score = 434 bits (480), Expect = 2e-119 Identities = 283/310 (91%), Gaps = 1/310 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||| ||||| |||| |||||| | || |||||||||| Sbjct 3073 GAACGAGACCTTAACCTGCTAACTAGCCCGGCCGACTTTGGTTAGCTGCTGGCTTCTTAG 3132 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| ||| || ||| |||||||||||||||||||||||||||||||||||||| Sbjct 3133 AGGGACTATTGGCGTCTAGCTAATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 3192 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| || Sbjct 3193 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAACGAGTTTATCACCTTGTCC 3252 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 3253 GAAAGGACTGGGTAATCTTGTGAAACTTTGTCGTGCTGGGGATAGAGCATTGCAATTATT 3312 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 3313 GCTCTTCAACGAGGAATTCCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 3372 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 3373 GCCCTTTGTA 3382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947166033408