Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2875 769 0.0 >seq2875 Length=7473 Score = 769 bits (852), Expect = 0.0 Identities = 497/540 (92%), Gaps = 7/540 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6885 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATT 6826 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 6825 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 6766 Query 127 GGCCCGC--GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184 || || |||||||| ||| || ||| || || |||| ||||||||||| Sbjct 6765 AGCGTATCAGATACACCTTAACTCCAAAAGGTGGGTCGTTAAACCCAGCTCCGCTTCATT 6706 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 || |||||||||| ||||||| |||||||||||||||| |||||||| ||||||||| Sbjct 6705 GAATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACT 6649 Query 245 TATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||||| ||| | ||| |||||||| ||| |||||||||||||||||||||||| Sbjct 6648 TATTCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 6590 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 6589 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 6530 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6529 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 6470 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6469 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 6410 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 6409 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCATTTTCTG 6350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635141361728