Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2875 713 0.0 >seq2875 Length=7473 Score = 713 bits (790), Expect = 0.0 Identities = 468/508 (92%), Gaps = 9/508 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| Sbjct 2269 GTACTCATTCCAATTATAAGACTTTAAA-AGCCCTATATTGTTATTTATTGTCACTACCT 2211 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2210 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2151 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 2150 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 2091 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| Sbjct 2090 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 2031 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||| | |||||||||||| ||||||||| | |||||||| ||||| Sbjct 2030 CAAGGCCATGCGATTAGAAAAGTTATTATGATTCACCAAGG-GACCCGAAGG--GTTGG- 1975 Query 301 TTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357 ||||||||||||||||||||||||||| |||||||||| || | ||||||||||||||| Sbjct 1974 TTTTTATCTAATAAATACACCCCTTCCAAGAAGTCGGGGCTTGTAAGCATGTATTAGCTC 1915 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||| ||||||| ||||||||||||| || |||| ||||||||||| ||||||||||||| Sbjct 1914 TAGATTTACCACAGTTATCCATGTAGCAAAGTACCATCAAATAAACTATAACTGATTTAA 1855 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| Sbjct 1854 TGAGCCATTCGCAGTTTCACAGTATAAAGTTGCTTATACTTAGACATGCATGGCTTAATC 1795 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 1794 TTTGAGACAAGCATATGACTACTGGCAG 1767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510345837056