Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2146 363 1e-95 seq2057 241 1e-58 >seq2146 Length=21837 Score = 363 bits (402), Expect = 1e-95 Identities = 1219/1864 (65%), Gaps = 44/1864 (2%) Strand=Plus/Minus Query 65080 GACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTT 65139 ||||||||||||||||||||| || || | | ||||| || |||||| | || ||||| Sbjct 17374 GACCGTGAACTGGATCGCATTGGCCGCAGGCCGGGTCCGGAGGTAGTACGTCCCCGTCTT 17315 Query 65140 GAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTCGG 65198 | || ||| ||||||| ||||| | || ||| || || || ||||| | Sbjct 17314 CAACCCCTTCTTCCAGCCATAGAAGTGCAT-GCTGGTAAGTTGGCCAAAGCTCGGCGCTT 17256 Query 65199 CCACATGCATATTCAACGACT--GACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||| || |||| |||| | ||| |||| || || || || || ||||| Sbjct 17255 GCAGATGGATGTTCA--GACTTTGGGACTGGCAGATGAAAGCGCCCCGGTCCGCGGCCAT 17198 Query 65257 GTCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 ||||||||| ||| | | ||| ||||||||||| ||||||||||| || | | | Sbjct 17197 GTCAATGAT--GACCTTCTGCGAGATCTCCCAGACCGTCTTGTACAG-CGCCTTGATCCG 17141 Query 65315 ATT-GGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCAT 65373 | |||||| | | | ||| | || || | | | || || || || || ||| Sbjct 17140 GTCCGGAATCCCGGGCACATTCTGAATCGAGCCGCCATGCGCTATGATCCGGTTCTTCAT 17081 Query 65374 CGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGA-TTGATGACTT 65432 | ||| ||||| || |||| || | | | || | ||| |||| ||||| Sbjct 17080 CTGCTCGTTCCACAGCCCTTGCTCGACGAGCTCGCGGAGCA-GCCACGGGTTGACGACTT 17022 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| | ||| ||||| ||| || | |||| |||| || |||||| | | Sbjct 17021 GGAACTCGCCAGCCAGCACACGGCGGGTGTACAGGTTGCTCGTGTAAGGCTCAAAGCACT 16962 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | || ||| || || || || || || || ||||| || |||| ||||| |||| Sbjct 16961 CGTTGAAGCCCAGGATCTGACTCGTCGAGGCCGTCGGCATAGGTGCGAGCAACAGCGAGT 16902 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 | || | |||| | |||||||| | | || |||||| ||| | | Sbjct 16901 TCCGAAGACCGTGCGAGGCAATGTTGCGCTTGATCTCAGCCCAGTCCCAAAG------AC 16848 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 || | ||| |||||| || | || || || | |||||||| | || Sbjct 16847 CGCTGGGGGTAACGCCCCACATGTCGTACTGGAGCTCGCCCTTGCTGGCCGGGCAGCCCT 16788 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCTCGAGTGCGGCA 65731 | | | ||||| || |||||||||||| | || | | | ||| || ||||| Sbjct 16787 CGTATGTCTCGTAGGTCCCGAGCTCCTTGGCAAGCTCGCACGATCG-CTCAAGAGCGGCG 16729 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCGCTCTCGTACGG 65790 || ||||||||||| || | || || ||| | ||||| || || | || Sbjct 16728 TGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTG-GCCTCGGGACTGTCAAA-GG 16671 Query 65791 CATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGAT 65849 | || ||||| | | || | |||||| ||||| | ||||| || |||||||| || | Sbjct 16670 CGTAGCCCATGATCATGAATGCGTCGGCGAGACCGTTGACTCCGATGCCGATGGGGCGGT 16611 Query 65850 GACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 | |||| || || | ||| | |||| || ||||||||||| || | |||||| || Sbjct 16610 GGCGCATGTTCGA-CTTCTTGGCCTCGGGCACAGGGTAGTAGTTCACATCGATGATCTTG 16552 Query 65909 TTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC--GAAATCAAAATGTT 65966 || | |||| || || | || | ||| | ||| ||| ||| | ||| Sbjct 16551 TTGAGGTTGCCACAGACGACCTTGGTGA--CCTCGTGAAGCTTCTTGAAGTCATA-TGTC 16495 Query 65967 TAGGAC---GATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 | | | | |||| || | | | | || || || | | || |||| Sbjct 16494 CTCGTGTTGGTTTGCGAGT--CGTAATGGATGTAGGTCGGCAGAGCCATACTGGCAAGGT 16437 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 |||||||||| | |||||| |||||| | ||||| | || || ||||| || ||| | Sbjct 16436 TGCAGACAGCGACCTCGTCCGGAGCGCTGTACTCTATGATCTCCGTGCAAAGGTTAGAGT 16377 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 |||||||| | |||| || || |||||| ||| || |||||||| | || Sbjct 16376 TCTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTTGTAAAGCA 16317 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 || | || |||| ||||| |||| ||| | | ||||| ||| || | |||| Sbjct 16316 TGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCCAGAACGGCGTACCAGAGCTTCTGAGCCT 16257 Query 66204 TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | ||||| || || | ||| | ||| ||||| | ||||||||| ||||| | Sbjct 16256 TGACCGTGCGGCGAGCACGACCCTCGCGCTCGTACTTCTCGTAGAGGGCCTCGAATTCCT 16197 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 |||| | || |||| |||| || |||| || ||||| |||||||| || || | Sbjct 16196 CACCATAGACGTCGGCAAGACCGGGGCACTCAGCGGGGCACATGAGCGACCACTCTCCGT 16137 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 |||||| || || ||| || | || || ||||| |||||||||||||| || || | Sbjct 16136 TCTGTTCGACTCGCTTCATGAACAAGTCGGGAATCCAAAGGGCGTAGAAGAGCTCACGGG 16077 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || |||||| ||||||| || || | | |||||||||||| |||| ||| | | Sbjct 16076 CGCGAACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCCGAGT 16017 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| || || | ||||||||| || | ||| || ||| |||||| |||||||||| Sbjct 16016 GCCAAGGCTCAATGTAGATGGCAAAAGCCCCCGGTCGCTTGTTGCCACCCTGGTCGACGT 15957 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 |||||||| ||||||||||| || | ||| || || | ||||| || ||| |||| Sbjct 15956 AGCGAGCGGTGTTGTTGAAGACTCGAAGCATGGGAACAATGCCGTTGGAGACGCCGTTGG 15897 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCC-CGTATATCGTGAACATTCAGACCAATACCACCG 66622 | || | ||| || || ||||| || || ||||| || || || || |||||| Sbjct 15896 TTCCAGCAATGTAAGAGCC-GGTGCCTCGGATGCAGTGAATGTTGAGCCCGATGCCACCG 15838 Query 66623 GCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGT 66680 |||||||| ||| || ||| || | |||| | | ||||| || ||||||| Sbjct 15837 GCCGTCTTGCTGATCATGGCGCAAGTCTTGAGGGTGTC--GTAGATGCCATCGATGGAGT 15780 Query 66681 CACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGA 66740 || |||| || || | ||| |||| || | ||||| |||||||| |||| || Sbjct 15779 CATCCTTCATCGTGACCAGGAAGCAGGATGACATCTGGGGGTTGGGTGTTCCGGCATTGA 15720 Query 66741 AGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGA 66800 |||||||||| | ||||| || ||||| | |||||| ||||| || |||||| Sbjct 15719 AGAGGGTGGGCGAGGCGTGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGTGTCGATGG 15660 Query 66801 CAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCC 66860 | ||||||| || ||||| |||| || |||||| || | | ||| |||| Sbjct 15659 CCTGGTCAATGTCCCGCCCGTGAATGCCGACGGCGACTCGCATGAGCATATGTTGCGGCC 15600 Query 66861 GTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920 ||| | | | | || || ||| | || ||||| || || ||||||| || | Sbjct 15599 TCTCGGCGACCTTGCCGTTAATGCGCAGCAGATAAGAGCGCTCGAGAGTCTTGAAGCCGA 15540 Query 66921 AGTA 66924 |||| Sbjct 15539 AGTA 15536 >seq2057 Length=22280 Score = 241 bits (266), Expect = 1e-58 Identities = 559/832 (67%), Gaps = 22/832 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||| | |||||| |||| | Sbjct 16973 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACTGCTGAGGAGATCGACCTT 16914 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||||| ||| | ||| | ||| | || || || | Sbjct 16913 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGA-CAATGAGCGTCACTTTATCAG 16855 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || || |||||||| ||||| ||||| | | || || Sbjct 16854 CCACGTCCTCGCCTTCTTCGCAGCATCAGACGGTATTGTCAACGAGAACCTCGTCGAGCG 16795 Query 61263 -TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| | | ||||||||||| | ||||| || || ||||||||||||||||| | Sbjct 16794 GTTTAGTTC-GGAGGTGCAAGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAGATCATGA 16736 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 ||||||| | |||||||||| ||| | | |||||||| || ||||| | || | Sbjct 16735 TGGAGAACATTCACTCGGAGACATACTCTCTGCTCATCGACACATACATTCGCGACCCTC 16676 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 | |||| || | || ||||||| ||||| || || | || |||| || || | Sbjct 16675 AGCAACGCGAGTACCTCTTTGATGCCATGGAGACCATCCCTGTCGTCAAGCAAAAGGCCG 16616 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGC 61499 | |||||| | ||||||| | ||| || | || |||| ||| |||||| | || Sbjct 16615 AGTGGGCCATGCGGTGGATCA--ACGACACCGAATCGACCTTTGCTGAGCGATTGATCGC 16558 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 || || | || ||||| | || ||| ||| || |||||| | ||||| ||| | || Sbjct 16557 CTTCGCCGCCGTGGAGGGCATCTTCTTCTCTGGGTCCTTTGCCTCCATCTTCTGGCTCAA 16498 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| || || || |||||||| || || ||| ||| ||| | || || |||||||| Sbjct 16497 GAAGCGCGGTCTCATGCCCGGCCTCACGTTCTCCAACGAGCTCATCAGCCGAGACGAGGG 16438 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC---GTC 61676 |||| || ||||| | || |||| | |||| ||| || || | Sbjct 16437 TCTGCACACCGACTTTGCGTGCCTACTCTTCA---GTCATCTCAAGAAGCGCCCACACCC 16381 Query 61677 GGAGGAGCGTGTGGGTGAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 |||| ||| | || | || || | || || || || ||||| || | || || | Sbjct 16380 TGAGG-TCGTCT---TGCGCATCATTGGCGAAGCTGTCACCATCGAGCAAGCTTTCCTCA 16325 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 |||| || |||| ||| | ||||||||||| | || ||| || || || | Sbjct 16324 CTGATGCGCTGCCATGTTCATTGATCGGCATGAACGCCCGTCTGATGAGCCAATACATCG 16265 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | ||||| |||||||| ||| |||||| | || | || | ||| ||| ||| || Sbjct 16264 AGTTTGTCGCCGACCGACTGCTGGTCGCCCTCGGCAACGAGAAGCACTACAATGCGACAA 16205 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 | || || || |||||||| | || || ||| | || ||||| || ||||| Sbjct 16204 ATCCCTTCGACTTCATGGAGAACATCTCTCTGCAAGGAAAGACTAACTTTTT 16153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397550624539040