Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20controversa_20[genbank_20GCA_5F001645045.1_202016-05-16] 3,586 sequences; 28,841,097 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1957 86.0 3e-11 >seq1957 Length=22408 Score = 86.0 bits (94), Expect = 3e-11 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 89025 GTGGACGACTCTGTCGTGCGCGGCACCACATCCAAGTTCATAATCGACCTCCTTCGCAAG 89084 ||||||||||| | |||||||| || || || ||| || || | | || | Sbjct 19889 GTGGACGACTCCATTGTGCGCGGAACTACGTCGAAGGAGATCATTCAAATGGCGCGGGAC 19948 Query 89085 TCTGGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTG 89144 | || || ||||||| | | ||||| || |||| |||||||| || |||||||| Sbjct 19949 GCCGGTGCACGCAAGGTCATCATGGCTTCCTGTGCTCCTCCGATCCGACACTCCAACGTG 20008 Query 89145 TACGGCATCGACATACCGTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGCACGAG 89204 |||||||||||||| || ||| | || ||| |||| ||| || | |||| |||| Sbjct 20009 TACGGCATCGACATGCCCTCGCGGCACGAACTCGTTGCCCATGGCCGGAGCGAGTCCGAG 20068 Query 89205 GTGGCTCTCCTCCTCGGAGCCGACCAGGTCATCTATCAGA 89244 ||||| | || ||||||| |||||||| |||| Sbjct 20069 GTGGCCAGTTACATCCAGGCCGACCTCGTCATCTACCAGA 20108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084641079143628