Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq427 558 2e-156 >seq427 Length=5015 Score = 558 bits (618), Expect = 2e-156 Identities = 536/680 (79%), Gaps = 44/680 (6%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| Sbjct 1985 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 1926 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 1925 ATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 1866 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 ||||||||||| || |||||||||||| ||||||||||||||| |||| ||| | Sbjct 1865 AGAGAGTTAAACAGTACGTGAAATTGTCAAAAGGGAAGCGCTTGAGGTTAGACATGCATG 1806 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGCCAGCATCAGCT 278 |||| |||||| | | | |||| | | | ||| | |||||||||||| | | Sbjct 1805 CAGTAT-TCAACCTTTCTTTTGATGGGTGTATT-TGCTGTTTTGCAGGCCAGCATCGGTT 1748 Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC---- 334 | | | |||||| || | |||||||| ||| || ||||||||| | Sbjct 1747 TTGTCTGCTGGATAATGGTAGAAGAAATGTGGCATCCTC--GGATGTGTTATAGTCTCCT 1690 Query 335 -CGGG-----GTGGAATGCGGCCCGCCTGGACTGAGGT---CCGC-------GCTC--CG 376 | | ||||| || || ||| |||| | || |||| |||| || Sbjct 1689 ACTTGATACAGTGGA-TG-GGACCGA--GGACCGCAGTGTGCCGCAAGGCAGGCTCTTCG 1634 Query 377 GC-------------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 | ||||||||||||||||||| |||||||||||||||| |||||| Sbjct 1633 GAGTACTTTCACACTTAGGATGCTGGCGTAATGGCCTTAAGCGGCCCGTCTTGAAACACG 1574 Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483 |||||||||||||||||| | ||||||| |||||||| ||||||| | ||||||||||| Sbjct 1573 GACCAAGGAGTCTAACATATTTGCGAGTCTTTGGGTGGCAAACCCATAGGCGTAATGAAA 1514 Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543 ||||| | |||||||| ||| | ||||||||||||||||||||| || | || ||| | Sbjct 1513 GTGAATGCAGGTGGGATCCCCTTGGGGTGCACCATCGACCGATCCAGAATTTTTAGGAAG 1454 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 1453 GATTTGAGTACGAGCACATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 1394 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 1393 CGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 1334 Query 664 AAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| Sbjct 1333 AAATTTGGGTATAGGGGCGA 1314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079983547850