Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1256 351 8e-92 seq47 131 1e-25 >seq1256 Length=115194 Score = 351 bits (388), Expect = 8e-92 Identities = 1122/1706 (66%), Gaps = 46/1706 (3%) Strand=Plus/Plus Query 65239 ACCACGATCTGCAGCCATGTCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTG 65296 ||| || || ||||||||||| ||||| ||| | | ||| |||||||| || |||||| Sbjct 73885 ACCTCGGTCGGCAGCCATGTCGATGAT--GACCTTCTGCGAGATCTCCCACACTGTCTTG 73942 Query 65297 TACAGGCGACGTACCTCAATTGG-AATCTCCTCAATGTCCTGGACTGAACCACGACGTGC 65355 ||||| | | | | | || ||| | | || ||||| || || | | || Sbjct 73943 TACAGT-GCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGC 74001 Query 65356 AATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAA 65415 || ||||| || |||| || ||||| ||| |||| ||| | | | || Sbjct 74002 TATGATGCGGTTCTTCATCTGTTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAG 74061 Query 65416 GTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475 | | |||| ||||||||||||||||| || ||||| ||| || | |||| ||| Sbjct 74062 CCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGT 74121 Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535 | || |||||| | || || ||| || || || || || ||||| ||||| || Sbjct 74122 GTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGG 74181 Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCA 65595 |||| || | |||||||| | |||| |||||||| | | |||| |||| Sbjct 74182 GGCGAGCAGGAGAGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATTTCGGCCCA 74241 Query 65596 GTTCCACA-TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGA 65654 || ||| | || | || ||| ||| ||| | ||| | |||||| || Sbjct 74242 GTCCCAGAGTCCACTGGGAGT-GAC-TCC-----CCAGAGATCGTATTGCAGCTCGCCCT 74294 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-G 65713 | |||| || || | | | ||||| || ||||||||| || | || | Sbjct 74295 TGCTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACG 74354 Query 65714 CTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGC 65772 | | |||||| ||||| || || |||||||| || | || || ||| | || Sbjct 74355 ATCG-CTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GC 74412 Query 65773 CTCATCGCTCTCGTACGGCATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTC 65831 ||| ||| ||| | ||| || ||||| | | |||| |||||| ||||| | |||| Sbjct 74413 CTCGGGGCTGTCGAA-GGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTC 74471 Query 65832 CAATACCGATGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAA 65890 | ||||||||||| || || |||| ||||| | ||| |||||| || ||||||||||| Sbjct 74472 CGATACCGATGGGGCGGTGGCGCATGTTGGA-CTTCTTCGCCTCGGGAACAGGGTAGTAG 74530 Query 65891 TTGATATCGATAATGCGATTCAAATTGCGTGTCACCACAT--GCACGATACGTCGCAATT 65948 |||| |||||| || || | |||| || || | | | | ||| | || Sbjct 74531 TTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCT-CGTGGAGCTT 74589 Query 65949 GTTCGAAATCAAAATGT---TTAGGACGATCGGGAGTGCC---GGACACCACAAACTTGG 66002 || ||| || | ||| | | || | |||| |||| | || | Sbjct 74590 CTT-GAAGTCGTA-TGTCCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAAGAA-----G 74642 Query 66003 GAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAA 66062 | || || | | || |||||||||||||| | ||| || |||||| | ||||| | | Sbjct 74643 GCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGA 74702 Query 66063 TTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGAT 66122 | || |||||||| ||| ||| |||||||| | |||| ||| || |||||| | Sbjct 74703 TCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGT 74762 Query 66123 T-GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 | ||| || |||||||| | |||| | || |||| ||||| || | ||| | | | Sbjct 74763 TAGCA-GCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACG 74821 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 |||| |||||| | ||||| || || || || | ||| | || ||||| | Sbjct 74822 GCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTC 74881 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 |||||||| ||||| || || | || || | |||| || |||| || Sbjct 74882 TCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGG 74941 Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361 |||||||||||||| || || | |||||| || || ||| || | ||||| ||||| Sbjct 74942 CACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAA 75001 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCG 66421 |||||||||||||| || || ||||| |||||| ||||||| || || | | |||| Sbjct 75002 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 75061 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGT 66481 |||||||| |||| ||| | ||||| || || | |||||||||||| | || ||| Sbjct 75062 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 75121 Query 66482 TTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACG 66541 ||| |||||| || ||||||||||||||| ||||||||||| || | ||| || ||| Sbjct 75122 TTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACG 75181 Query 66542 AGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC-CGTATATCGTG 66600 | |||||||| || || || ||| | ||| || || || || || || ||| Sbjct 75182 ATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCC-GGTACCACGGATGCAGTG 75240 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTC 66658 | || || || || ||||| |||||||| ||| || || || | | |||| Sbjct 75241 GATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTC 75300 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | |||||||| || ||||| |||| ||||| | ||| |||| || | ||| Sbjct 75301 --GTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGA 75358 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 || |||||||| | || |||||||||||| | || || || ||||| | ||| Sbjct 75359 GGGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGAC 75418 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 ||| ||||| || |||||| | | || ||| || || || |||| ||| | Sbjct 75419 ATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACT 75478 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAG 66898 ||||| || | || ||| || || ||| | | | | ||||| ||| | |||||| Sbjct 75479 CGCATGAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGCAGCAGATAGGAG 75538 Query 66899 CGTTCCAGGGTCTTGATACCAAAGTA 66924 || || |||||||||| || ||||| Sbjct 75539 CGCTCGAGGGTCTTGAAGCCGAAGTA 75564 >seq47 Length=87938 Score = 131 bits (144), Expect = 1e-25 Identities = 387/593 (65%), Gaps = 13/593 (2%) Strand=Plus/Minus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || |||||| | ||||| |||| ||| | |||||||| || ||||| | || | Sbjct 15845 CAGGGAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCC 15786 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 || | || || | ||| | || || ||||| || || | || |||| || || Sbjct 15785 CGCACAGCGCGAGTACCTCTTCGACGCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGC 15726 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTGCTG 61497 || |||||| | ||||||| | || | | || || |||| || || || | Sbjct 15725 CGAGTGGGCCCTGCGCTGGATCAACG--ACGAGGACTCCACCTTTGCCGAGCGCCTGGTT 15668 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||| || || || ||| | ||||| ||| | Sbjct 15667 GCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTC 15608 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| |||||| ||| ||| | || || |||||| Sbjct 15607 AAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 15548 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG--- 61674 || |||| || |||||| ||||| |||| || | || ||| || ||| Sbjct 15547 GGTCTGCACACCGACTTTGCTTGCTTGCTCTTCA---GCCACCTCAAGAAGCGGCCGCAC 15491 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 | || | | || | || || ||| | || || || || |||| || ||| Sbjct 15490 CCCGATGTCGTTCTGCG---CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTG 15434 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | ||| ||| | ||||||||||| |||| ||| ||||| || Sbjct 15433 ACCGATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTTATGAGCCAGTACATC 15374 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 |||||||| || ||||| ||| |||| | | || | || | ||| || | | | Sbjct 15373 GAATTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAGCACTACAACGCCACA 15314 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 || || || || |||||||| | || |||||| | |||||||| || || || Sbjct 15313 AATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 15261 Score = 114 bits (126), Expect = 1e-20 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||||| |||||| |||| | Sbjct 16157 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 16098 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||||| ||| | ||| | || | ||| ||||| | Sbjct 16097 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGA-CAACGAGCGACACTTCATCAG 16039 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || || || |||||||| ||||| | | || || Sbjct 16038 CCACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCG 15979 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| || ||| |||| || | | ||||| || || |||||||||||||| || Sbjct 15978 GTTCAGCTCAG-AGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAAT 15925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559927630240