Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq22 336 2e-87 seq47 122 7e-23 >seq22 Length=350823 Score = 336 bits (372), Expect = 2e-87 Identities = 1116/1705 (65%), Gaps = 43/1705 (3%) Strand=Plus/Plus Query 65239 ACCACGATCTGCAGCCATGTCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTG 65296 ||| || || ||||||||||| ||||| ||| | | ||| |||||||| || |||||| Sbjct 65416 ACCTCGGTCGGCAGCCATGTCGATGAT--GACCTTCTGCGAGATCTCCCACACTGTCTTG 65473 Query 65297 TACAGGCGACGTACCTCAATTGG-AATCTCCTCAATGTCCTGGACTGAACCACGACGTGC 65355 ||||| | | | | | || ||| | | || ||| | || || | | || Sbjct 65474 TACAGT-GCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGAATCGAGCCGCCGTGGGC 65532 Query 65356 AATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAA 65415 || ||||| || |||| ||| ||||| ||| |||| ||| | | | || Sbjct 65533 TATGATGCGGTTCTTCATCTGCTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAG 65592 Query 65416 GTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475 | | |||| ||||||||||||||||| || ||||| ||| || | |||| ||| Sbjct 65593 CCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGT 65652 Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535 | || |||||| | || || ||| || || || || || || || ||||| || Sbjct 65653 GTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCGGTGGGCATAGG 65712 Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCA 65595 |||| || | |||||||| | |||| |||||||| | | ||| |||| Sbjct 65713 GGCGAGCAGGAGGGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATCTCGGCCCA 65772 Query 65596 GTTCCACA-TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGA 65654 || ||| | || | | || ||| ||| ||| | || | |||||| || Sbjct 65773 GTCCCAGAGTCCGCTGGGGGT-GAC-TCC-----CCAGAGGTCGTATTGCAGCTCGCCCT 65825 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-G 65713 | |||| ||| || | | | ||||| || ||||||||| || | || | Sbjct 65826 TGCTGGTCGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACG 65885 Query 65714 CTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGC 65772 | | |||||| ||||| || || |||||||| || | || || ||| | || Sbjct 65886 ATCG-CTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GC 65943 Query 65773 CTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCC 65832 ||| ||| ||| ||| |||||| | | |||| |||||| ||||| | ||||| Sbjct 65944 CTCGGGGCTGTCGAACGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCC 66003 Query 65833 AATACCGATGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAAT 65891 ||||||||||| || || |||| ||||| | ||| |||||| || ||||||||||| | Sbjct 66004 GATACCGATGGGGCGGTGGCGCATGTTGGA-CTTCTTCGCCTCGGGAACAGGGTAGTAGT 66062 Query 65892 TGATATCGATAATGCGATTCAAATTGCGTGTCACCACAT--GCACGATACGTCGCAATTG 65949 ||| |||||| || || | |||| || || | | | | ||| | || Sbjct 66063 TGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCT-CGTGGAGCTTC 66121 Query 65950 TTCGAAATCAAAATGT---TTAGGACGATCGGGAGTGCC---GGACACCACAAACTTGGG 66003 || ||| || | ||| | | || | |||| |||| | || || Sbjct 66122 TT-GAAGTCGTA-TGTCCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAAGAA-----GG 66174 Query 66004 AAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAAT 66063 || || | | || |||||||||||||| | ||| || |||||| | ||||| | || Sbjct 66175 TAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGAT 66234 Query 66064 TTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT 66123 || |||||||| || ||| |||||||| | |||| ||| || |||||| || Sbjct 66235 CTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTT 66294 Query 66124 GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGC 66183 | || |||||||| | |||| | || |||| ||||| || | ||| | | ||| Sbjct 66295 GGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGC 66354 Query 66184 GTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTC 66243 || |||||| | ||||| || || || || | ||| | || ||||| | || Sbjct 66355 GTACCAAAGCTTTTGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTC 66414 Query 66244 GTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACA 66303 |||||| ||||| || || | || || | |||| || |||| || || Sbjct 66415 GTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCA 66474 Query 66304 CATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAG 66363 |||||||||||| || || | |||||| || || ||| || | ||||| ||||| || Sbjct 66475 CATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAG 66534 Query 66364 GGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAG 66423 |||||||||||| || || ||||| |||||| ||||||| || || | | |||||| Sbjct 66535 GGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAG 66594 Query 66424 GAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTT 66483 |||||| |||| ||| | ||||| || || | |||||||||||| | || ||| || Sbjct 66595 GAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTT 66654 Query 66484 G-CCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGA 66542 | |||||| || ||||||||||||||| ||||||||||| || | ||| || |||| Sbjct 66655 GTTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGA 66714 Query 66543 GCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC-CGTATATCGTGA 66601 |||||||| || || || ||| | ||| || || || || || || ||| Sbjct 66715 TACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCC-GGTACCACGGATGCAGTGG 66773 Query 66602 ACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCC 66659 | || || || || ||||| |||||||| ||| || || || | | |||| Sbjct 66774 ATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTC- 66832 Query 66660 GGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGG 66719 | | |||||||| || ||||| |||| ||||| | ||| |||| || | ||| | Sbjct 66833 -GTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAG 66891 Query 66720 GTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACA 66779 | |||||||| | || |||||||||||| | || || || ||||| | |||| Sbjct 66892 GGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACA 66951 Query 66780 TGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATC 66839 || ||||| || |||||| | | || ||| || || || |||| ||| || Sbjct 66952 TGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTC 67011 Query 66840 GCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGC 66899 |||| || | || ||| || || ||| | | | | ||||| ||| | ||||||| Sbjct 67012 GCATGAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGCAGCAGATAGGAGC 67071 Query 66900 GTTCCAGGGTCTTGATACCAAAGTA 66924 | || |||||||||| || ||||| Sbjct 67072 GCTCGAGGGTCTTGAAGCCGAAGTA 67096 >seq47 Length=84389 Score = 122 bits (134), Expect = 7e-23 Identities = 386/593 (65%), Gaps = 14/593 (2%) Strand=Plus/Plus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || |||||| | ||||| |||| ||| | |||||||| || ||||| | || | Sbjct 58885 CAGGGAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCC 58944 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 || | || || | ||| | || || ||||| || || | || |||| || || Sbjct 58945 CGCACAGCGCGAGTACCTCTTCGACGCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGC 59004 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTGCTG 61497 || |||||| | ||||||| | || | | || || |||| || || || | Sbjct 59005 CGAGTGGGCCCTGCGCTGGATCAACG--ACGAAGACTCCACCTTTGCCGAGCGCCTGGTT 59062 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||| || || || ||| | ||||| ||| | Sbjct 59063 GCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTC 59122 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| |||||| ||| ||| | || || |||||| Sbjct 59123 AAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 59182 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG--- 61674 || |||| || |||||| ||||| |||| || | || ||| || ||| Sbjct 59183 GGTCTGCACACCGACTTTGCTTGCTTGCTCTTCA---GCCACCTCAAGAAGCGGCCGCAC 59239 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 | || | | || | || || ||| | || || || || |||| || ||| Sbjct 59240 CCCGATGTCGTTCTGCG---CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTG 59296 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | ||| ||| | ||||||||||| |||| ||| ||||| || Sbjct 59297 ACCGATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTTATGAGCCAGTACATC 59356 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 |||||||| || || || ||| |||| | | || | || | ||| || | | | Sbjct 59357 GAATTTGTCGCTGA-CGACTGCTGGTAGCCCTCGGGAACGAGAAGCACTACAACGCCACA 59415 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 || || || || |||||||| | || |||||| | |||||||| || || || Sbjct 59416 AATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 59468 Score = 114 bits (126), Expect = 1e-20 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||||| |||||| |||| | Sbjct 58573 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 58632 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||||| ||| | ||| | || | ||| ||||| | Sbjct 58633 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGA-CAACGAGCGACACTTCATCAG 58691 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || || || |||||||| ||||| | | || || Sbjct 58692 CCACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCG 58751 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| || ||| |||| || | | ||||| || || |||||||||||||| || Sbjct 58752 GTTCAGCTCAG-AGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAAT 58805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565722680800