Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4882 562 1e-157 >seq4882 Length=11811 Score = 562 bits (622), Expect = 1e-157 Identities = 531/674 (79%), Gaps = 34/674 (5%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| Sbjct 5806 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 5747 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 5746 ATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 5687 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 ||||||||||| || |||||||||||| ||||||||||||||| |||| ||| | Sbjct 5686 AGAGAGTTAAACAGTACGTGAAATTGTCAAAAGGGAAGCGCTTGAGGTTAGACATGCATG 5627 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGCCAGCATCAGCT 278 |||| |||||| | | || |||| | | | ||| | |||||||||||| | | Sbjct 5626 CAGTAT-TCAACCTTTCTTTTGGAGGGTGTATT-TGCTGTTTTGCAGGCCAGCATCGGTT 5569 Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCG-- 336 | | | |||||| | | |||||||| ||| || ||||||||| | Sbjct 5568 TTGTCTGCTGGATAATAGTAGGAGAAATGTGGCATCCTC--GGATGTGTTATAGTCTCTT 5511 Query 337 ------------GGGTGGAAT-GCGGCCCGCC-TGGACTG-AGGTCCGCGCTCCGGC--- 378 || ||| | | || |||| || | | | | | || || ||| Sbjct 5510 ATTGGATACAGTGGATGGGACCGAGGACCGCAGTGTGCCGTATGGCGGCTCTTCGGAGAC 5451 Query 379 ---------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 ||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 5450 CTTCGCACTTAGGATGCTGGCGTAATGGCCTTAAGCGGCCCGTCTTGAAACACGGACCAA 5391 Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489 |||||||||||| | ||||||| |||||||| ||||||| | |||||||||||||||| Sbjct 5390 GGAGTCTAACATATTTGCGAGTCTTTGGGTGGCAAACCCATAGGCGTAATGAAAGTGAAT 5331 Query 490 GGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549 | |||||||| ||| | ||||||||||||||||||||| || | | ||||||||||| Sbjct 5330 GCAGGTGGGATCCCTTAGGGGTGCACCATCGACCGATCCGGAATTTCTAGGATGGATTTG 5271 Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 |||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 5270 AGTACGAGCACATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGC 5211 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct 5210 CAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTT 5151 Query 670 GGGTATAGGGGCGA 683 |||||||||||||| Sbjct 5150 GGGTATAGGGGCGA 5137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079811132750