Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4882 414 2e-113 seq5543 82.4 1e-13 >seq4882 Length=11811 Score = 414 bits (458), Expect = 2e-113 Identities = 246/257 (96%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7913 ACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 7972 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||| Sbjct 7973 CCTGTTATTGCCTCAAACTTCCATTAGCTAGACGCCAATAGTCCCTCTAAGAAGCCAGCG 8032 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 8033 GCTAACCAAAGTCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 8092 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8093 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 8152 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 8153 AGAGCTATCAATCTGTC 8169 Score = 228 bits (252), Expect = 1e-57 Identities = 143/154 (93%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 ||||||||||||||| ||| || |||||||||||||||||||||||||| | ||||| | Sbjct 8283 CCTCAAACTTCCATTAGCTAGACGCCAATAGTCCCTCTAAGAAGCCAGCGGCTAACCAAA 8342 Query 132 GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 191 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8343 GTCGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAAT 8402 Query 192 CACTCCACCAACTAAGAACGGCCATGCACCACCA 225 ||||||||||||||||||||||||||||||| || Sbjct 8403 CACTCCACCAACTAAGAACGGCCATGCACCATCA 8436 Score = 178 bits (196), Expect = 2e-42 Identities = 98/98 (100%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8915 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 8974 Query 221 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||||||||||| Sbjct 8975 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 9012 Score = 75.2 bits (82), Expect = 2e-11 Identities = 41/41 (100%), Gaps = 0/41 (0%) Strand=Plus/Plus Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||||||||||||||| Sbjct 8761 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 8801 >seq5543 Length=38891 Score = 82.4 bits (90), Expect = 1e-13 Identities = 73/89 (82%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 |||| |||||||||||||||| ||| | ||||||| |||| |||||||| ||||| Sbjct 10358 ACTCATTGGCTCCGTCAGTGTA-CGCACCTGCGGCCGCTCTCATCCAAGGGCATTACAGA 10300 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCT 90 |||||| ||||||||||| ||| || ||| Sbjct 10299 CCTGTT-TTGCCTCAAACCTCCGTTAGCT 10272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796732034205