Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689965.1_202016-07-20] 8,805 sequences; 43,736,635 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq248 343 1e-89 seq4834 131 1e-25 >seq248 Length=52618 Score = 343 bits (380), Expect = 1e-89 Identities = 1116/1704 (65%), Gaps = 42/1704 (2%) Strand=Plus/Minus Query 65239 ACCACGATCTGCAGCCATGTCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTG 65296 ||| || || ||||||||||| ||||| ||| | | ||| |||||||| || |||||| Sbjct 28873 ACCTCGGTCGGCAGCCATGTCGATGAT--GACCTTCTGCGAGATCTCCCACACTGTCTTG 28816 Query 65297 TACAGGCGACGTACCTCAATTGG-AATCTCCTCAATGTCCTGGACTGAACCACGACGTGC 65355 ||||| | | | | | || ||| | | || ||| | || || | | || Sbjct 28815 TACAGT-GCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGAATCGAGCCGCCGTGGGC 28757 Query 65356 AATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAA 65415 || ||||| || |||| ||| ||||| ||| |||| ||| | | | || Sbjct 28756 TATGATGCGGTTCTTCATCTGCTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAG 28697 Query 65416 GTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475 | | |||| ||||||||||||||||| || ||||| ||| || | |||| ||| Sbjct 28696 CCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGT 28637 Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535 | || |||||| | || || ||| || || || || || || || ||||| || Sbjct 28636 GTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCGGTGGGCATAGG 28577 Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCA 65595 |||| || | |||||||| | |||| |||||||| | | ||| |||| Sbjct 28576 GGCGAGCAGGAGGGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATCTCGGCCCA 28517 Query 65596 GTTCCACA-TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGA 65654 || ||| | || | | || ||| ||| ||| | || | |||||| || Sbjct 28516 GTCCCAGAGTCCGCTGGGGGT-GAC-TCC-----CCAGAGGTCGTATTGCAGCTCGCCCT 28464 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-G 65713 | |||| ||| || | | | ||||| || ||||||||| || | || | Sbjct 28463 TGCTGGTCGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACG 28404 Query 65714 CTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGC 65772 | | |||||| ||||| || || |||||||| || | || || ||| | || Sbjct 28403 ATCG-CTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GC 28346 Query 65773 CTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCC 65832 ||| ||| ||| ||| |||||| | | |||| |||||| ||||| | ||||| Sbjct 28345 CTCGGGGCTGTCGAACGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCC 28286 Query 65833 AATACCGATGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAAT 65891 ||||||||||| || || |||| ||||| | ||| |||||| || ||||||||||| | Sbjct 28285 GATACCGATGGGGCGGTGGCGCATGTTGGA-CTTCTTCGCCTCGGGAACAGGGTAGTAGT 28227 Query 65892 TGATATCGATAATGCGATTCAAATTGCGTGTCACCACAT--GCACGATACGTCGCAATTG 65949 ||| |||||| || || | |||| || || | | | | ||| | || Sbjct 28226 TGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCT-CGTGGAGCTTC 28168 Query 65950 TTCGAAATCAAAATGT---TTAGGACGATCGGGAGTGCC---GGACACCACAAACTTGGG 66003 || ||| || | ||| | | || | |||| |||| | || || Sbjct 28167 TT-GAAGTCGTA-TGTCCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAAGAA-----GG 28115 Query 66004 AAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAAT 66063 || || | | || |||||||||||||| | ||| || |||||| | ||||| | || Sbjct 28114 TAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGAT 28055 Query 66064 TTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT 66123 || |||||||| || ||| |||||||| | |||| ||| || |||||| || Sbjct 28054 CTCCGTGCACAGGTTGGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTT 27995 Query 66124 GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGC 66183 | || |||||||| | |||| | || |||| ||||| || | ||| | | ||| Sbjct 27994 GGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGC 27935 Query 66184 GTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTC 66243 || |||||| | ||||| || || || || | ||| | || ||||| | || Sbjct 27934 GTACCAAAGCTTTTGGGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTC 27875 Query 66244 GTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACA 66303 |||||| ||||| || || | || || | |||| || |||| || || Sbjct 27874 GTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCA 27815 Query 66304 CATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAG 66363 |||||||||||| || || | |||||| || || ||| || | ||||| ||||| || Sbjct 27814 CATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAG 27755 Query 66364 GGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAG 66423 |||||||||||| || || ||||| |||||| ||||||| || || | | |||||| Sbjct 27754 GGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAG 27695 Query 66424 GAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTT 66483 |||||| |||| ||| | ||||| || || | |||||||||||| | || ||| || Sbjct 27694 GAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTT 27635 Query 66484 GCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAG 66543 | |||||| || ||||||||||||||| ||||||||||| || | ||| || |||| Sbjct 27634 GTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGAT 27575 Query 66544 CCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC-CGTATATCGTGAA 66602 |||||||| || || || ||| | ||| || || || || || || ||| | Sbjct 27574 ACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCC-GGTACCACGGATGCAGTGGA 27516 Query 66603 CATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTCCG 66660 || || || || ||||| |||||||| ||| || || || | | |||| Sbjct 27515 TGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTC-- 27458 Query 66661 GAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGG 66720 | | |||||||| || ||||| |||| ||||| | ||| |||| || | ||| || Sbjct 27457 GTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGG 27398 Query 66721 TTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACAT 66780 |||||||| | || |||||||||||| | || || || ||||| | ||||| Sbjct 27397 GTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACAT 27338 Query 66781 GTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCG 66840 | ||||| || |||||| | | || ||| || || || |||| ||| ||| Sbjct 27337 GAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCG 27278 Query 66841 CATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCG 66900 ||| || | || ||| || || ||| | | | | ||||| ||| | |||||||| Sbjct 27277 CATGAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGCAGCAGATAGGAGCG 27218 Query 66901 TTCCAGGGTCTTGATACCAAAGTA 66924 || |||||||||| || ||||| Sbjct 27217 CTCGAGGGTCTTGAAGCCGAAGTA 27194 >seq4834 Length=10274 Score = 131 bits (144), Expect = 1e-25 Identities = 387/593 (65%), Gaps = 13/593 (2%) Strand=Plus/Plus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || |||||| | ||||| |||| ||| | |||||||| || ||||| | || | Sbjct 8978 CAGGGAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCC 9037 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 || | || || | ||| | || || ||||| || || | || |||| || || Sbjct 9038 CGCACAGCGCGAGTACCTCTTCGACGCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGC 9097 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTGCTG 61497 || |||||| | ||||||| | || | | || || |||| || || || | Sbjct 9098 CGAGTGGGCCCTGCGCTGGATCAACG--ACGAAGACTCCACCTTTGCCGAGCGCCTGGTT 9155 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||| || || || ||| | ||||| ||| | Sbjct 9156 GCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTC 9215 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| |||||| ||| ||| | || || |||||| Sbjct 9216 AAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 9275 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG--- 61674 || |||| || |||||| ||||| |||| || | || ||| || ||| Sbjct 9276 GGTCTGCACACCGACTTTGCTTGCTTGCTCTTCA---GCCACCTCAAGAAGCGGCCGCAC 9332 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 | || | | || | || || ||| | || || || || |||| || ||| Sbjct 9333 CCCGATGTCGTTCTGCG---CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTG 9389 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | ||| ||| | ||||||||||| |||| ||| ||||| || Sbjct 9390 ACCGATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTTATGAGCCAGTACATC 9449 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 |||||||| || ||||| ||| |||| | | || | || | ||| || | | | Sbjct 9450 GAATTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAGCACTACAACGCCACA 9509 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 || || || || |||||||| | || |||||| | |||||||| || || || Sbjct 9510 AATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 9562 Score = 114 bits (126), Expect = 1e-20 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||||| |||||| |||| | Sbjct 8666 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 8725 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||||| ||| | ||| | || | ||| ||||| | Sbjct 8726 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGA-CAACGAGCGACACTTCATCAG 8784 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || || || |||||||| ||||| | | || || Sbjct 8785 CCACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCG 8844 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| || ||| |||| || | | ||||| || || |||||||||||||| || Sbjct 8845 GTTCAGCTCAG-AGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAAT 8898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397525336605200