Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq32 351 8e-92 seq198 131 1e-25 >seq32 Length=96279 Score = 351 bits (388), Expect = 8e-92 Identities = 1122/1706 (66%), Gaps = 46/1706 (3%) Strand=Plus/Minus Query 65239 ACCACGATCTGCAGCCATGTCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTG 65296 ||| || || ||||||||||| ||||| ||| | | ||| |||||||| || |||||| Sbjct 33320 ACCTCGGTCGGCAGCCATGTCGATGAT--GACCTTCTGCGAGATCTCCCACACTGTCTTG 33263 Query 65297 TACAGGCGACGTACCTCAATTGG-AATCTCCTCAATGTCCTGGACTGAACCACGACGTGC 65355 ||||| | | | | | || ||| | | || ||||| || || | | || Sbjct 33262 TACAGT-GCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGC 33204 Query 65356 AATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAA 65415 || ||||| || |||| || ||||| ||| |||| ||| | | | || Sbjct 33203 TATGATGCGGTTCTTCATCTGTTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAG 33144 Query 65416 GTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475 | | |||| ||||||||||||||||| || ||||| ||| || | |||| ||| Sbjct 33143 CCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGT 33084 Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535 | || |||||| | || || ||| || || || || || ||||| ||||| || Sbjct 33083 GTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGG 33024 Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCA 65595 |||| || | |||||||| | |||| |||||||| | | |||| |||| Sbjct 33023 GGCGAGCAGGAGAGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATTTCGGCCCA 32964 Query 65596 GTTCCACA-TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGA 65654 || ||| | || | || ||| ||| ||| | ||| | |||||| || Sbjct 32963 GTCCCAGAGTCCACTGGGAGT-GAC-TCC-----CCAGAGATCGTATTGCAGCTCGCCCT 32911 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-G 65713 | |||| || || | | | ||||| || ||||||||| || | || | Sbjct 32910 TGCTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACG 32851 Query 65714 CTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGC 65772 | | |||||| ||||| || || |||||||| || | || || ||| | || Sbjct 32850 ATCG-CTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GC 32793 Query 65773 CTCATCGCTCTCGTACGGCATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTC 65831 ||| ||| ||| | ||| || ||||| | | |||| |||||| ||||| | |||| Sbjct 32792 CTCGGGGCTGTCGAA-GGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTC 32734 Query 65832 CAATACCGATGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAA 65890 | ||||||||||| || || |||| ||||| | ||| |||||| || ||||||||||| Sbjct 32733 CGATACCGATGGGGCGGTGGCGCATGTTGGA-CTTCTTCGCCTCGGGAACAGGGTAGTAG 32675 Query 65891 TTGATATCGATAATGCGATTCAAATTGCGTGTCACCACAT--GCACGATACGTCGCAATT 65948 |||| |||||| || || | |||| || || | | | | ||| | || Sbjct 32674 TTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCT-CGTGGAGCTT 32616 Query 65949 GTTCGAAATCAAAATGT---TTAGGACGATCGGGAGTGCC---GGACACCACAAACTTGG 66002 || ||| || | ||| | | || | |||| |||| | || | Sbjct 32615 CTT-GAAGTCGTA-TGTCCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAAGAA-----G 32563 Query 66003 GAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAA 66062 | || || | | || |||||||||||||| | ||| || |||||| | ||||| | | Sbjct 32562 GCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGA 32503 Query 66063 TTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGAT 66122 | || |||||||| ||| ||| |||||||| | |||| ||| || |||||| | Sbjct 32502 TCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGT 32443 Query 66123 T-GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 | ||| || |||||||| | |||| | || |||| ||||| || | ||| | | | Sbjct 32442 TAGCA-GCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACG 32384 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 |||| |||||| | ||||| || || || || | ||| | || ||||| | Sbjct 32383 GCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTC 32324 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 |||||||| ||||| || || | || || | |||| || |||| || Sbjct 32323 TCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGG 32264 Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361 |||||||||||||| || || | |||||| || || ||| || | ||||| ||||| Sbjct 32263 CACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAA 32204 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCG 66421 |||||||||||||| || || ||||| |||||| ||||||| || || | | |||| Sbjct 32203 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 32144 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGT 66481 |||||||| |||| ||| | ||||| || || | |||||||||||| | || ||| Sbjct 32143 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 32084 Query 66482 TTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACG 66541 ||| |||||| || ||||||||||||||| ||||||||||| || | ||| || ||| Sbjct 32083 TTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACG 32024 Query 66542 AGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC-CGTATATCGTG 66600 | |||||||| || || || ||| | ||| || || || || || || ||| Sbjct 32023 ATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCC-GGTACCACGGATGCAGTG 31965 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTC 66658 | || || || || ||||| |||||||| ||| || || || | | |||| Sbjct 31964 GATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTC 31905 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | |||||||| || ||||| |||| ||||| | ||| |||| || | ||| Sbjct 31904 --GTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGA 31847 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 || |||||||| | || |||||||||||| | || || || ||||| | ||| Sbjct 31846 GGGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGAC 31787 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 ||| ||||| || |||||| | | || ||| || || || |||| ||| | Sbjct 31786 ATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACT 31727 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAG 66898 ||||| || | || ||| || || ||| | | | | ||||| ||| | |||||| Sbjct 31726 CGCATGAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGCAGCAGATAGGAG 31667 Query 66899 CGTTCCAGGGTCTTGATACCAAAGTA 66924 || || |||||||||| || ||||| Sbjct 31666 CGCTCGAGGGTCTTGAAGCCGAAGTA 31641 >seq198 Length=283761 Score = 131 bits (144), Expect = 1e-25 Identities = 387/593 (65%), Gaps = 13/593 (2%) Strand=Plus/Plus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || |||||| | ||||| |||| ||| | |||||||| || ||||| | || | Sbjct 153927 CAGGGAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCC 153986 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 || | || || | ||| | ||||| ||||| || || | || |||| || || Sbjct 153987 CGCACAGCGCGAGTACCTCTTCGACGCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGC 154046 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTGCTG 61497 || |||||| | ||||||| | || | | || || |||| || || || | Sbjct 154047 CGAGTGGGCCCTGCGCTGGATCAACG--ACGAGGACTCCACTTTTGCCGAGCGCCTGGTT 154104 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || ||||| | || ||| || || || ||| | ||||| ||| | Sbjct 154105 GCCTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTC 154164 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| |||||| ||| ||| | || || |||||| Sbjct 154165 AAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 154224 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG--- 61674 || |||| || |||||| ||||| |||| || | || ||| || ||| Sbjct 154225 GGTCTGCACACCGACTTTGCTTGCTTGCTCTTCA---GCCACCTCAAGAAGCGGCCGCAC 154281 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 | || | | || | || || ||| | || || || || |||| || ||| Sbjct 154282 CCCGATGTCGTTCTGCG---CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTG 154338 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | ||| ||| | ||||||||||| |||| ||| ||||| || Sbjct 154339 ACCGATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTTATGAGCCAGTACATC 154398 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 || ||||| || ||||| ||| |||| | | || | || | ||| || | | | Sbjct 154399 GAGTTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAGCACTACAACGCCACA 154458 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 || || || || |||||||| | ||||||||| | |||||||| || || || Sbjct 154459 AATCCCTTCGACTTCATGGAGAACATTTCGCTGCAAGGCAAGACAAACTTCTT 154511 Score = 111 bits (122), Expect = 1e-19 Identities = 168/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||||| |||||| |||| | Sbjct 153615 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 153674 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||||| ||| | ||| | || | ||| ||||| | Sbjct 153675 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGA-CAACGAGCGACACTTCATCAG 153733 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || || || || |||||||| ||||| | | || || Sbjct 153734 CCACGTCCTCGCATTCTTCGCTGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCG 153793 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| || ||| |||| || | | ||||| || || |||||||||||||| || Sbjct 153794 GTTCAGCTCAG-AGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAAT 153847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566226598240