Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1029 307 2e-81 seq349 149 9e-34 seq920 75.2 2e-11 >seq1029 Length=41673 Score = 307 bits (340), Expect = 2e-81 Identities = 208/229 (91%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 5618 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 5675 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| || ||||| |||||| Sbjct 5676 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAAAGTTTCACAAGATT 5735 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||| |||||||||| |||||||| | | ||||||||||||||||||| Sbjct 5736 ACCCAGTCCTTTCGGACAAGGTGATAAACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCG 5795 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5796 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 5844 >seq349 Length=1292 Score = 149 bits (164), Expect = 9e-34 Identities = 166/218 (76%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||||||||||| |||| |||||||||| |||||| | Sbjct 794 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTTG-TGACCCGCGCTTACTGGGAATT-C 851 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | ||| || ||| | |||| ||||||| ||||| | || Sbjct 852 CTCGTTGATGGGGGACAGTTTCAACCCCCAGTCCCGATCACGAGCGGGGTTCAACGGGTT 911 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| ||||| ||| | || || ||| || ||| |||||||||| Sbjct 912 ACCCGCGCCTCTCGGCGCAGGGTAGGCACACGCTGACCCGCCCATTGTGGCGCGCGTGCA 971 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||||||||||| Sbjct 972 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 1009 >seq920 Length=462479 Score = 75.2 bits (82), Expect = 2e-11 Identities = 83/108 (77%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | ||| || | ||| ||||| |||| ||| | | |||||||| ||| | ||||| Sbjct 306758 CCCCGTCCTTTCAGACAACGTGATCAACTCATTGGCTCCGTCAGTGTA-CGCACCTGCGG 306816 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 || |||| |||||||| ||||||||||| ||||||||||| ||| Sbjct 306817 CCGCTCTCATCCAAGGGCATTACAGACCTGTT-TTGCCTCAAACCTCC 306863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751987353240