Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1029 407 3e-111 seq1351 150 3e-34 >seq1029 Length=41673 Score = 407 bits (450), Expect = 3e-111 Identities = 277/309 (90%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 11 GGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAGCCAG 69 ||||||||||| || ||| |||||| ||||| ||| |||||||||| |||||| |||| Sbjct 6570 GGCCGGGCCTTCTCTCTTGGTGATCCGGCATGCTCTTTACTGGGTGTGTCGGGGAACCAG 6511 Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 || |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| Sbjct 6510 GATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATATATTAGCA 6451 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 6450 TGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGA 6391 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||||||| ||||| | |||||||| || ||||||||||||||||||||| Sbjct 6390 TTAATAGGGATAGTTGGGGGCATTAGTATTCACATGCTAGAGGTGAAATTCTTGGATTTT 6331 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| Sbjct 6330 GTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAA 6272 Query 310 AGTTAGGGG 318 |||||||| Sbjct 6271 GGTTAGGGG 6263 >seq1351 Length=14029 Score = 150 bits (166), Expect = 3e-34 Identities = 106/120 (88%), Gaps = 1/120 (1%) Strand=Plus/Plus Query 11 GGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAGCCAG 69 ||||||||||| || ||| |||||| ||||| ||| |||||||||| |||||| |||| Sbjct 42 GGCCGGGCCTTCTCTCTTGGTGATCCGGCATGCTCTTTACTGGGTGTGTCGGGGAACCAG 101 Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 || |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| Sbjct 102 GATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATATATTAGCA 161 Score = 113 bits (124), Expect = 8e-23 Identities = 65/67 (97%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 13963 ATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATG 14022 Query 189 ATTAATA 195 ||||||| Sbjct 14023 ATTAATA 14029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915184112128