Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq90 462 4e-128 seq314 104 4e-20 seq918 98.7 2e-18 seq1234 87.8 3e-15 >seq90 Length=3325 Score = 462 bits (512), Expect = 4e-128 Identities = 261/264 (99%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 11 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 70 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 71 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 130 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 131 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 190 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 191 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCGAGGGACTAAAGGATCGATAGGC 250 Query 272 CACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||| Sbjct 251 CACACTTTCATGGTTTGTATTCAC 274 >seq314 Length=195568 Score = 104 bits (114), Expect = 4e-20 Identities = 77/89 (87%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| ||| | || || ||||||||||||||||||||||||||| Sbjct 195480 TACTAAGTTGAATTACTGTTGCGATAACCCTCCATCAGTAGGGTAAAACTAACCTGTCTC 195539 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCC 88 | ||||||||||||||||||||||||||| Sbjct 195540 ACGACGGTCTAAACCCAGCTCACGTTCCC 195568 >seq918 Length=57639 Score = 98.7 bits (108), Expect = 2e-18 Identities = 56/57 (98%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 11 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 67 >seq1234 Length=21656 Score = 87.8 bits (96), Expect = 3e-15 Identities = 48/48 (100%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 248 CGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21656 CGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 21609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854385167616