Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1029 196 6e-48 seq1351 131 2e-28 >seq1029 Length=41673 Score = 196 bits (216), Expect = 6e-48 Identities = 160/192 (83%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||| Sbjct 6405 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATATATTCG 6464 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| || |||||||||||||||||||||||| |||| |||||| |||||||||| | || Sbjct 6465 GGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATCCTGGTTCCCCGACA 6524 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| | ||| |||| | || |||||||||| | ||| || | ||||||| ||| Sbjct 6525 CACCCAGTAAAGAGCATGCCGGATCACCAAGAGAGAAGGCCCGGCCAAGCAGTACACGCT 6584 Query 184 GTGAGGCGGACC 195 || | ||||||| Sbjct 6585 GTTAAGCGGACC 6596 >seq1351 Length=14029 Score = 131 bits (144), Expect = 2e-28 Identities = 118/146 (81%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 52 TGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTC 111 ||||||| ||||||||| || |||||||||||||||||||||||| |||| |||||| || Sbjct 161 TGCTAATATATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAATC 102 Query 112 CTGGTTCCTCCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTA 169 |||||||| | |||| ||| | ||| |||| | || |||||||||| | ||| || Sbjct 101 CTGGTTCCCCGACACACCCAGTAAAGAGCATGCCGGATCACCAAGAGAGAAGGCCCGGCC 42 Query 170 ATGCAGTACTCGCCGTGAGGCGGACC 195 | ||||||| ||| || | ||||||| Sbjct 41 AAGCAGTACACGCTGTTAAGCGGACC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595189990224