Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq908 345 3e-90 seq214 134 1e-26 >seq908 Length=183814 Score = 345 bits (382), Expect = 3e-90 Identities = 1121/1706 (66%), Gaps = 46/1706 (3%) Strand=Plus/Minus Query 65239 ACCACGATCTGCAGCCATGTCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTG 65296 ||| || || ||||||||||| ||||| ||| | | ||| |||||||| || |||||| Sbjct 171484 ACCTCGGTCGGCAGCCATGTCGATGAT--GACCTTCTGCGAGATCTCCCACACTGTCTTG 171427 Query 65297 TACAGGCGACGTACCTCAATTGG-AATCTCCTCAATGTCCTGGACTGAACCACGACGTGC 65355 ||||| | | | | | || ||| | | || ||||| || || | | || Sbjct 171426 TACAGT-GCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGC 171368 Query 65356 AATAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAA 65415 || ||||| || |||| || ||||| ||| |||| ||| | | | || Sbjct 171367 TATGATGCGGTTCTTCATCTGTTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAG 171308 Query 65416 GTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475 | | |||| ||||||||||||||||| || ||||| ||| || | |||| ||| Sbjct 171307 CCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGT 171248 Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535 | || |||||| | || || ||| || || || || || ||||| ||||| || Sbjct 171247 GTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGG 171188 Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCA 65595 |||| || | |||||||| | |||| |||||||| | | |||| |||| Sbjct 171187 GGCGAGCAGGAGAGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATTTCGGCCCA 171128 Query 65596 GTTCCACA-TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGA 65654 || ||| | || | || ||| ||| ||| | ||| | |||||| || Sbjct 171127 GTCCCAGAGTCCACTGGGAGT-GAC-TCC-----CCAGAGATCGTATTGCAGCTCGCCCT 171075 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-G 65713 | |||| || || | | | ||||| || ||||||||| || | || | Sbjct 171074 TGCTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACG 171015 Query 65714 CTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGC 65772 | | |||||| ||||| || || |||||||| || | || || ||| | || Sbjct 171014 ATCG-CTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GC 170957 Query 65773 CTCATCGCTCTCGTACGGCATA-CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTC 65831 ||| ||| ||| | ||| || ||||| | | |||| |||||| ||||| | |||| Sbjct 170956 CTCGGGGCTGTCGAA-GGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTC 170898 Query 65832 CAATACCGATGGGACGATGACGCAAATTGGAACGTCT-CGCCTCAGGTACAGGGTAGTAA 65890 | ||||||||||| || || |||| ||||| | ||| |||||| || ||||||||||| Sbjct 170897 CGATACCGATGGGGCGGTGGCGCATGTTGGA-CTTCTTCGCCTCGGGAACAGGGTAGTAG 170839 Query 65891 TTGATATCGATAATGCGATTCAAATTGCGTGTCACCACAT--GCACGATACGTCGCAATT 65948 |||| |||||| || || | |||| || || | | | | ||| | || Sbjct 170838 TTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCT-CGTGGAGCTT 170780 Query 65949 GTTCGAAATCAAAATGT---TTAGGACGATCGGGAGTGCC---GGACACCACAAACTTGG 66002 || ||| || | ||| | | || | |||| |||| | || | Sbjct 170779 CTT-GAAGTCGTA-TGTCCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAAGAA-----G 170727 Query 66003 GAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAA 66062 | || || | | || |||||||||||||| | ||| || |||||| | ||||| | | Sbjct 170726 GCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGA 170667 Query 66063 TTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGAT 66122 | || |||||||| ||| ||| |||||||| | |||| ||| || |||||| | Sbjct 170666 TCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGT 170607 Query 66123 T-GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 | ||| || |||||||| | |||| | || |||| ||||| || | ||| | | | Sbjct 170606 TAGCA-GCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACG 170548 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 |||| |||||| | ||||| || || || || | ||| | || ||||| | Sbjct 170547 GCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTC 170488 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 |||||||| ||||| || || | || || | |||| || |||| | || Sbjct 170487 TCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGG 170428 Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361 |||||||||||||| || || | |||||| || || ||| || | || || ||||| Sbjct 170427 CACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAA 170368 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCG 66421 |||||||||||||| || || ||||| |||||| ||||||| || || | | |||| Sbjct 170367 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 170308 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGT 66481 |||||||| |||| ||| | ||||| || || | |||||||||||| | || ||| Sbjct 170307 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 170248 Query 66482 TTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACG 66541 ||| |||||| |||||||||||||||||| ||||||||||| || | ||| || ||| Sbjct 170247 TTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACG 170188 Query 66542 AGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC-CGTATATCGTG 66600 | |||||||| || || || ||| | ||| || || || || || || ||| Sbjct 170187 ATACCGTTAGAGACACCGTTAGTTCCGGCAATGTACGAGCC-GGTACCACGGATGCAGTG 170129 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTC 66658 | || || || || ||||| |||||||| ||| || || || | |||| Sbjct 170128 GATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTC 170069 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | || || || || ||||| |||| ||||| | ||| ||||||| | ||| Sbjct 170068 --GTAGATACCATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGA 170011 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 || ||||||||| | || |||||||||||| | || || || ||||| | ||| Sbjct 170010 GGGTTGGGTGTGCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGAC 169951 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 ||| ||||| || |||||| | | || ||| || || || |||| ||| | Sbjct 169950 ATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACT 169891 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAG 66898 ||||| || | || ||| || || ||| | | | | ||||| ||| | ||||| Sbjct 169890 CGCATGAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGCAGCAGATAGGAA 169831 Query 66899 CGTTCCAGGGTCTTGATACCAAAGTA 66924 || || |||||||||| || ||||| Sbjct 169830 CGCTCGAGGGTCTTGAAGCCGAAGTA 169805 >seq214 Length=80960 Score = 134 bits (148), Expect = 1e-26 Identities = 388/593 (65%), Gaps = 13/593 (2%) Strand=Plus/Minus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || |||||| | ||||| |||| ||| | |||||||| || ||||| | || | Sbjct 11835 CAGGGAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCC 11776 Query 61380 GGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGC 61439 || | || || | ||| | ||||| ||||| || || | || |||| || || Sbjct 11775 CGCACAGCGCGAGTACCTCTTCGACGCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGC 11716 Query 61440 GGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTGCTG 61497 || |||||| | ||||||| | || | | || || |||| || || || | Sbjct 11715 CGAGTGGGCCCTGCGCTGGATCAACG--ACGAGGACTCCACCTTTGCCGAGCGCCTGGTT 11658 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || |||||| | || ||| || || || ||| | ||||| ||| | Sbjct 11657 GCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTC 11598 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || ||||||||||| |||||| ||| ||| | || || |||||| Sbjct 11597 AAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAG 11538 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCG--- 61674 || |||| || |||||| ||||| |||| || | || ||| || ||| Sbjct 11537 GGTCTGCACACCGACTTTGCTTGCTTGCTCTTCA---GCCACCTCAAGAAGCGGCCGCAC 11481 Query 61675 TCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTG 61734 | || | | || | || || ||| | || || || || |||| || ||| Sbjct 11480 CCCGATGTCGTTCTGCG---CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTG 11424 Query 61735 ACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATT 61794 || || ||| | ||| ||| | ||||||||||| |||| ||| ||||| || Sbjct 11423 ACCGATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTTATGAGCCAGTACATC 11364 Query 61795 GAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 |||||||| || ||||| ||| |||| | | || | || | ||| || | | | Sbjct 11363 GAATTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAGCACTACAACGCCACA 11304 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 || || || || |||||||| | || |||||| | |||||||| || || || Sbjct 11303 AATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 11251 Score = 114 bits (126), Expect = 1e-20 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || || || |||||||||| |||||| |||| | Sbjct 12147 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 12088 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| | |||||||| ||| | ||| | || | ||| ||||| | Sbjct 12087 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGA-CAACGAGCGACACTTCATCAG 12029 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| ||||| || || || |||||||| ||||| | | || || Sbjct 12028 CCACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCG 11969 Query 61263 TTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316 ||| || ||| |||| || | | ||||| || || |||||||||||||| || Sbjct 11968 GTTCAGCTCAG-AGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAAT 11915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559588455040