Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq969 307 2e-81 seq911 96.9 5e-18 >seq969 Length=8386 Score = 307 bits (340), Expect = 2e-81 Identities = 208/229 (91%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 3424 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 3481 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| || ||||| |||||| Sbjct 3482 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAAAGTTTCACAAGATT 3541 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| |||| |||||||||| |||||||| | | ||||||||||||||||||| Sbjct 3542 ACCCAGTCCTTTCGGACAAGGTGATAAACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCG 3601 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3602 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3650 >seq911 Length=72655 Score = 96.9 bits (106), Expect = 5e-18 Identities = 91/115 (79%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 |||||||||| | ||| || | |||||||||| | || ||| | | |||||||||||| Sbjct 55790 AAGATTACCCCGTCCTTTCAGACAAGGTGATAAAGTCATTGGCTCCGTCAGTGTAGCGCA 55849 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 | ||||||| |||| |||| ||||||| |||||| ||||||||||||||| Sbjct 55850 CCTGCGGCCGCTCTCATCAAAGGTTATCACAGTCCTGTT-TTGCCTCAAACTTCC 55903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751992918980