Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq969 562 1e-157 >seq969 Length=8386 Score = 562 bits (622), Expect = 1e-157 Identities = 531/674 (79%), Gaps = 34/674 (5%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| Sbjct 2392 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 2333 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 2332 ATTGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 2273 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 ||||||||||| || |||||||||||| ||||||||||||||| |||| ||| | Sbjct 2272 AGAGAGTTAAACAGTACGTGAAATTGTCAAAAGGGAAGCGCTTGAGGTTAGACATGCATG 2213 Query 220 CAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGGCCAGCATCAGCT 278 |||| |||||| | | || |||| | | | ||| | |||||||||||| | | Sbjct 2212 CAGTAT-TCAACCTTTCTTTTGGAGGGTGTATT-TGCTGTTTTGCAGGCCAGCATCGGTT 2155 Query 279 CGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCG-- 336 | | | |||||| | | |||||||| ||| || ||||||||| | Sbjct 2154 TTGTCTGCTGGATAATAGTAGGAGAAATGTGGCATCCTC--GGATGTGTTATAGTCTCTT 2097 Query 337 ------------GGGTGGAAT-GCGGCCCGCC-TGGACTG-AGGTCCGCGCTCCGGC--- 378 || ||| | | || |||| || | | | | | || || ||| Sbjct 2096 ATTGGATACAGTGGATGGGACCGAGGACCGCAGTGTGCCGTATGGCGGCTCTTCGGAGAC 2037 Query 379 ---------TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAA 429 ||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 2036 CTTCGCACTTAGGATGCTGGCGTAATGGCCTTAAGCGGCCCGTCTTGAAACACGGACCAA 1977 Query 430 GGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAAC 489 |||||||||||| | ||||||| |||||||| ||||||| | |||||||||||||||| Sbjct 1976 GGAGTCTAACATATTTGCGAGTCTTTGGGTGGCAAACCCATAGGCGTAATGAAAGTGAAT 1917 Query 490 GGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549 | |||||||| ||| | ||||||||||||||||||||| || | | ||||||||||| Sbjct 1916 GCAGGTGGGATCCCTTAGGGGTGCACCATCGACCGATCCGGAATTTCTAGGATGGATTTG 1857 Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 |||| ||||| | |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1856 AGTACGAGCACATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGC 1797 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| Sbjct 1796 CAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTT 1737 Query 670 GGGTATAGGGGCGA 683 |||||||||||||| Sbjct 1736 GGGTATAGGGGCGA 1723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079979150600