Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq177 86.0 3e-11 >seq177 Length=32582 Score = 86.0 bits (94), Expect = 3e-11 Identities = 234/354 (66%), Gaps = 12/354 (3%) Strand=Plus/Minus Query 88974 CGCAAGTTCACCGCCGTGGGCCGAGAGTGCAGGGACAAGGCCGTGGTCGTGGTGGACGAC 89033 |||||||| | ||| ||| | |||| | || ||| ||| | | |||||||| Sbjct 15343 CGCAAGTTGAACGCTATGGCGCTGGAGTTCGCCGAAAAGAGCGTCTTGCTTGTGGACGAT 15284 Query 89034 TCTGTCGTGCGCGGCACCACATCCAAGTTCATAATCGACCTCCTTCGCAAGTCTGGCGCC 89093 ||| | || ||||| || || || ||| || ||| | | || | | || || Sbjct 15283 TCTATTGTTCGCGGAACGACCTCAAAGGAGATCATCCAAATGGCGCGGGACGCCGGTGCG 15224 Query 89094 ACCAAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTGTACGGCATC 89153 |||||| | | || |||||| |||| || ||||| || ||||||||||||| ||| Sbjct 15223 CGCAAGGTTATCATGGCCTCTTGCGCTCCTCCAATCCGACACTCCAACGTGTACGGTATC 15164 Query 89154 GACATACCGTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGCACGAGGTGGCTCTC 89213 ||||| || ||| | |||||| | ||| ||||| | |||| |||||| || | Sbjct 15163 GACATGCCTTCGCGACATGAGCTCGTCGCTCACGGTCGGAGCGAGTCCGAGGTCGCCAGC 15104 Query 89214 CTCCTCGGAGCCGACCAGGTCATCTATCAGAGT-GTCGA---CGACTTGCAAGCGGCCTG 89269 | || ||||||| |||||||| |||| | || | | ||| |||| | Sbjct 15103 TACATCCAGGCCGACCTCGTCATCTACCAGACTCTTCCAGATCTCATTGAGAGCGTC--- 15047 Query 89270 TCGCCAGTTCAATCCCTCCATC--ACGGCCTTTGAGGCCTCTGTCTTTGTCGGC 89321 ||||| ||||| ||||| ||| ||| ||| || ||| ||||||| |||| Sbjct 15046 -CGCCAATTCAACCCCTCGATCGAACG--CTTCGACTGCTCCGTCTTTGACGGC 14996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084712603939656