Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq609 289 4e-76
seq327 273 3e-71
seq155 233 3e-59
seq698 201 2e-49
seq472 158 2e-36
seq309 118 2e-24
seq760 111 2e-22
seq319 100 4e-19
seq554 95.1 2e-17
>seq609
Length=1006
Score = 289 bits (320), Expect = 4e-76
Identities = 207/233 (89%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |
Sbjct 698 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATTCC 640
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCC-ATCACGATGAAATTTCA-AAGAT 118
||||||||||| ||| |||||||||| ||||||||| | ||||| | ||||| |||||
Sbjct 639 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCCAGCACGACAGAGTTTCACAAGAT 580
Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATC-AGTGTAGCGCGCGTG 177
||||| ||||| |||||||||| ||| ||||| || | || |||||||||||||||
Sbjct 579 TACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCGAGTGTAGCGCGCGTG 520
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 467
>seq327
Length=1039
Score = 273 bits (302), Expect = 3e-71
Identities = 197/222 (89%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 11 CAGGGACGTAG-TCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAA 69
|||||||||| |||||||||||| |||||||| ||||||||||||||| ||||||||||
Sbjct 1 CAGGGACGTAACTCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-CCTCGTTGAA 58
Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACC 128
|| ||| |||||||||| |||||||||| ||||| | ||||| |||||||||| ||||
Sbjct 59 GAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATTACCCAGACC 118
Query 129 TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAAC 188
| |||||||||| ||| ||||| || | ||||||||||||||||||||||||||||
Sbjct 119 TTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAAC 178
Query 189 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 220
>seq155
Length=1069
Score = 233 bits (258), Expect = 3e-59
Identities = 184/211 (87%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 23 CAACG-CGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTG 81
||||| |||||| |||||||| ||||||||||||||| ||||||||| || ||| |||||
Sbjct 549 CAACGACGAGCT-GATGACTCACGCTTACTAGGAATT-CCTCGTTGA-GAGCAATAATTG 605
Query 82 CAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG-GACCTGTCGGCCAAG 139
||||| || ||||||| ||||| | ||||| |||||||||| ||||| ||||||||
Sbjct 606 CAATGCTC-ATCCCCAGCACGACAGAGTTTCACAAGATTACCCCAGACCTTCCGGCCAAG 664
Query 140 GTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 199
|| ||| ||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct 665 GTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 724
Query 200 TCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||
Sbjct 725 TCACAGACCTGTTATTGCCTCAAACTTCCGT 755
>seq698
Length=1023
Score = 201 bits (222), Expect = 2e-49
Identities = 159/184 (86%), Gaps = 5/184 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |
Sbjct 843 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 900
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 901 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 960
Query 120 ACCCGGACCTGTCGG-CCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| ||||| ||| ||||||| ||| ||||| || | ||||||||||||||||||
Sbjct 961 ACCCAGACCTTCCGGACCAAGGTTATA-ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGC 1019
Query 179 GGCC 182
||||
Sbjct 1020 GGCC 1023
>seq472
Length=1029
Score = 158 bits (174), Expect = 2e-36
Identities = 104/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175
|||||||| ||||| |||||||||| ||| ||||| || | |||||||||||||||
Sbjct 1 GATTACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCG 60
Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 115
>seq309
Length=1077
Score = 118 bits (130), Expect = 2e-24
Identities = 86/96 (90%), Gaps = 3/96 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGG-CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59
|||||||| |||||||||| |||||||||||| |||||||| |||||||||||||||
Sbjct 4 GTACAAAGTATCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT- 61
Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCC 95
|||||||||||| ||| |||||||||| ||||||||
Sbjct 62 CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCC 97
>seq760
Length=1096
Score = 111 bits (122), Expect = 2e-22
Identities = 68/70 (97%), Gaps = 2/70 (3%)
Strand=Plus/Minus
Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1068 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG-TATTGCCTC 1010
Query 221 AAACTTCCGT 230
|||| |||||
Sbjct 1009 AAAC-TCCGT 1001
>seq319
Length=1122
Score = 100 bits (110), Expect = 4e-19
Identities = 179/239 (75%), Gaps = 32/239 (13%)
Strand=Plus/Minus
Query 22 TCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGA-CCAA--CAA 78
|||||||||||| |||||||| ||||||||||||| |||||||| ||||| ||| ||
Sbjct 1120 TCAACGCGAGCT-GATGACTCACGCTTACTAGGAA-TTCCTCGTAGAAGAGACAAATTAA 1063
Query 79 TTG-CAATGATCTA-TCCCCATCACGATGAAATTTCA-AAGA-TTACCCGGACCTGT--- 131
||| ||||| |||| |||||| ||||| | |||| |||| ||||| |||| ||
Sbjct 1062 TTGACAATGCTCTACTCCCCAGCACGACAGTAGTTCACAAGACTTACCACGACCCGTTCC 1003
Query 132 CGGCC----AAGG-TGATAGA----CTCGTTGAATACATCAGTGTAGCGCGCGTG-CGGC 181
||| | |||| | ||| | | ||| | | ||||||||||||||||| ||||
Sbjct 1002 CGGACCGTAAAGGTTAATAAACCTCCGCGTGGCCTCTGTCAGTGTAGCGCGCGTGCCGGC 943
Query 182 CCAG-AACAT--CTAAGGGCATC-ACA-GACC-TGTTATT-GC---CTCAAACTTCCGT 230
| || ||||| |||||||||| ||| |||| ||||||| || || || |||||||
Sbjct 942 CAAGAAACATACGTAAGGGCATCAACACGACCTTGTTATTCGCCTACTAAACCTTCCGT 884
>seq554
Length=1014
Score = 95.1 bits (104), Expect = 2e-17
Identities = 66/71 (93%), Gaps = 3/71 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTAC-TAGGAATTT 59
|||||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||| ||
Sbjct 71 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCACGCTTACGTAGGAA-TT 14
Query 60 CCTCGTTGAAG 70
|||||||||||
Sbjct 13 CCTCGTTGAAG 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751994346840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |