Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq609 289 4e-76 seq327 273 3e-71 seq155 233 3e-59 seq698 201 2e-49 seq472 158 2e-36 seq309 118 2e-24 seq760 111 2e-22 seq319 100 4e-19 seq554 95.1 2e-17 >seq609 Length=1006 Score = 289 bits (320), Expect = 4e-76 Identities = 207/233 (89%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 698 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATTCC 640 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCC-ATCACGATGAAATTTCA-AAGAT 118 ||||||||||| ||| |||||||||| ||||||||| | ||||| | ||||| ||||| Sbjct 639 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCCAGCACGACAGAGTTTCACAAGAT 580 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATC-AGTGTAGCGCGCGTG 177 ||||| ||||| |||||||||| ||| ||||| || | || ||||||||||||||| Sbjct 579 TACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCGAGTGTAGCGCGCGTG 520 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 519 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 467 >seq327 Length=1039 Score = 273 bits (302), Expect = 3e-71 Identities = 197/222 (89%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 11 CAGGGACGTAG-TCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAA 69 |||||||||| |||||||||||| |||||||| ||||||||||||||| |||||||||| Sbjct 1 CAGGGACGTAACTCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-CCTCGTTGAA 58 Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACC 128 || ||| |||||||||| |||||||||| ||||| | ||||| |||||||||| |||| Sbjct 59 GAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATTACCCAGACC 118 Query 129 TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAAC 188 | |||||||||| ||| ||||| || | |||||||||||||||||||||||||||| Sbjct 119 TTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAAC 178 Query 189 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 |||||||||||||||||||||||||||||||||||||||||| Sbjct 179 ATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 220 >seq155 Length=1069 Score = 233 bits (258), Expect = 3e-59 Identities = 184/211 (87%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 23 CAACG-CGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTG 81 ||||| |||||| |||||||| ||||||||||||||| ||||||||| || ||| ||||| Sbjct 549 CAACGACGAGCT-GATGACTCACGCTTACTAGGAATT-CCTCGTTGA-GAGCAATAATTG 605 Query 82 CAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG-GACCTGTCGGCCAAG 139 ||||| || ||||||| ||||| | ||||| |||||||||| ||||| |||||||| Sbjct 606 CAATGCTC-ATCCCCAGCACGACAGAGTTTCACAAGATTACCCCAGACCTTCCGGCCAAG 664 Query 140 GTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 199 || ||| ||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct 665 GTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCA 724 Query 200 TCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||| Sbjct 725 TCACAGACCTGTTATTGCCTCAAACTTCCGT 755 >seq698 Length=1023 Score = 201 bits (222), Expect = 2e-49 Identities = 159/184 (86%), Gaps = 5/184 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| | Sbjct 843 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT-C 900 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 901 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 960 Query 120 ACCCGGACCTGTCGG-CCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| ||| ||||||| ||| ||||| || | |||||||||||||||||| Sbjct 961 ACCCAGACCTTCCGGACCAAGGTTATA-ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGC 1019 Query 179 GGCC 182 |||| Sbjct 1020 GGCC 1023 >seq472 Length=1029 Score = 158 bits (174), Expect = 2e-36 Identities = 104/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 |||||||| ||||| |||||||||| ||| ||||| || | ||||||||||||||| Sbjct 1 GATTACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGGCTCTGTCAGTGTAGCGCGCG 60 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 115 >seq309 Length=1077 Score = 118 bits (130), Expect = 2e-24 Identities = 86/96 (90%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 1 GTACAAAGGG-CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTT 59 |||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||| Sbjct 4 GTACAAAGTATCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGAATT- 61 Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCC 95 |||||||||||| ||| |||||||||| |||||||| Sbjct 62 CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCC 97 >seq760 Length=1096 Score = 111 bits (122), Expect = 2e-22 Identities = 68/70 (97%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1068 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG-TATTGCCTC 1010 Query 221 AAACTTCCGT 230 |||| ||||| Sbjct 1009 AAAC-TCCGT 1001 >seq319 Length=1122 Score = 100 bits (110), Expect = 4e-19 Identities = 179/239 (75%), Gaps = 32/239 (13%) Strand=Plus/Minus Query 22 TCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGA-CCAA--CAA 78 |||||||||||| |||||||| ||||||||||||| |||||||| ||||| ||| || Sbjct 1120 TCAACGCGAGCT-GATGACTCACGCTTACTAGGAA-TTCCTCGTAGAAGAGACAAATTAA 1063 Query 79 TTG-CAATGATCTA-TCCCCATCACGATGAAATTTCA-AAGA-TTACCCGGACCTGT--- 131 ||| ||||| |||| |||||| ||||| | |||| |||| ||||| |||| || Sbjct 1062 TTGACAATGCTCTACTCCCCAGCACGACAGTAGTTCACAAGACTTACCACGACCCGTTCC 1003 Query 132 CGGCC----AAGG-TGATAGA----CTCGTTGAATACATCAGTGTAGCGCGCGTG-CGGC 181 ||| | |||| | ||| | | ||| | | ||||||||||||||||| |||| Sbjct 1002 CGGACCGTAAAGGTTAATAAACCTCCGCGTGGCCTCTGTCAGTGTAGCGCGCGTGCCGGC 943 Query 182 CCAG-AACAT--CTAAGGGCATC-ACA-GACC-TGTTATT-GC---CTCAAACTTCCGT 230 | || ||||| |||||||||| ||| |||| ||||||| || || || ||||||| Sbjct 942 CAAGAAACATACGTAAGGGCATCAACACGACCTTGTTATTCGCCTACTAAACCTTCCGT 884 >seq554 Length=1014 Score = 95.1 bits (104), Expect = 2e-17 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTAC-TAGGAATTT 59 |||||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||| || Sbjct 71 GTACAAAGGGCAGGGACGTAATCAACGCGAGC-TGATGACTCACGCTTACGTAGGAA-TT 14 Query 60 CCTCGTTGAAG 70 ||||||||||| Sbjct 13 CCTCGTTGAAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751994346840