Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq760 161 6e-38
seq705 161 6e-38
seq609 161 6e-38
seq545 161 6e-38
seq538 161 6e-38
seq518 161 6e-38
seq319 156 2e-36
seq472 140 2e-31
seq738 102 5e-20
>seq760
Length=1096
Score = 161 bits (178), Expect = 6e-38
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | |||||||
Sbjct 698 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 639
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 638 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 582
>seq705
Length=1217
Score = 161 bits (178), Expect = 6e-38
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | |||||||
Sbjct 43 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 102
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 103 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 159
>seq609
Length=1006
Score = 161 bits (178), Expect = 6e-38
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | |||||||
Sbjct 164 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 105
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 104 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 48
>seq545
Length=1095
Score = 161 bits (178), Expect = 6e-38
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | |||||||
Sbjct 814 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 755
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 754 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 698
>seq538
Length=1087
Score = 161 bits (178), Expect = 6e-38
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | |||||||
Sbjct 819 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 760
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 759 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 703
>seq518
Length=1135
Score = 161 bits (178), Expect = 6e-38
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||||||| || || | | |||||||
Sbjct 167 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 226
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 227 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 283
>seq319
Length=1122
Score = 156 bits (172), Expect = 2e-36
Identities = 106/118 (90%), Gaps = 1/118 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAG-ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
|||||||||| ||||||||||||||||||||||||||||| || || | | ||||||
Sbjct 558 GAACCCAAAGTACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCC 499
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 498 CGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 441
>seq472
Length=1029
Score = 140 bits (154), Expect = 2e-31
Identities = 102/116 (88%), Gaps = 2/116 (2%)
Strand=Plus/Plus
Query 4 CCCAAAGAC-TTTGATTTCTCGTAAGGT-GCCGAGCGAGTCAAAATGATAACATCGCCCG 61
||||||||| |||||||||||||||||| |||||| || || || | | ||||||||
Sbjct 423 CCCAAAGACCTTTGATTTCTCGTAAGGTCGCCGAGTGACACATAAGATTGAGATCGCCCG 482
Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 483 ATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 538
>seq738
Length=1298
Score = 102 bits (112), Expect = 5e-20
Identities = 61/64 (95%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 54 ATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCT 113
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
Sbjct 15 ATCGCCCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTT 74
Query 114 TCGA 117
||||
Sbjct 75 TCGA 78
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278397974640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |