Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq760 161 6e-38 seq705 161 6e-38 seq609 161 6e-38 seq545 161 6e-38 seq538 161 6e-38 seq518 161 6e-38 seq319 156 2e-36 seq472 140 2e-31 seq738 102 5e-20 >seq760 Length=1096 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 698 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 639 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 638 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 582 >seq705 Length=1217 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 43 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 102 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 103 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 159 >seq609 Length=1006 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 164 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 105 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 104 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 48 >seq545 Length=1095 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 814 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 755 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 754 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 698 >seq538 Length=1087 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 819 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 760 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 759 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 703 >seq518 Length=1135 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||||||| || || | | ||||||| Sbjct 167 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCCC 226 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 227 GATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 283 >seq319 Length=1122 Score = 156 bits (172), Expect = 2e-36 Identities = 106/118 (90%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAG-ACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 |||||||||| ||||||||||||||||||||||||||||| || || | | |||||| Sbjct 558 GAACCCAAAGTACTTTGATTTCTCGTAAGGTGCCGAGCGACACATAAGATTGAGATCGCC 499 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 498 CGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 441 >seq472 Length=1029 Score = 140 bits (154), Expect = 2e-31 Identities = 102/116 (88%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 4 CCCAAAGAC-TTTGATTTCTCGTAAGGT-GCCGAGCGAGTCAAAATGATAACATCGCCCG 61 ||||||||| |||||||||||||||||| |||||| || || || | | |||||||| Sbjct 423 CCCAAAGACCTTTGATTTCTCGTAAGGTCGCCGAGTGACACATAAGATTGAGATCGCCCG 482 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct 483 ATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 538 >seq738 Length=1298 Score = 102 bits (112), Expect = 5e-20 Identities = 61/64 (95%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 54 ATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCT 113 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | Sbjct 15 ATCGCCCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTT 74 Query 114 TCGA 117 |||| Sbjct 75 TCGA 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278397974640