Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq327 360 3e-97 seq472 354 1e-95 seq609 347 2e-93 seq155 331 1e-88 seq760 316 3e-84 seq545 219 7e-55 seq538 178 2e-42 seq319 172 9e-41 >seq327 Length=1039 Score = 360 bits (398), Expect = 3e-97 Identities = 234/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 137 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 196 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 197 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 256 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 257 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 316 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 317 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 376 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 377 AGAGCTATCAATCTGTC 393 >seq472 Length=1029 Score = 354 bits (392), Expect = 1e-95 Identities = 234/258 (91%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 91 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 92 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 151 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| | | || || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 152 ACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 211 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA-CCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || Sbjct 212 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCCATAAAATCATGA 271 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 272 AAGAGCTATCAATCTGTC 289 >seq609 Length=1006 Score = 347 bits (384), Expect = 2e-93 Identities = 234/259 (90%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTC-AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 551 ACTCGCTGGCTCTGTCGAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 492 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 491 ACCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGC 432 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 |||| | | || || ||||||| ||||||||||||||||||||||||||||||||| Sbjct 431 GACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 372 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG- 239 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 371 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGA 312 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 311 AAAGAGCTATCAATCTGTC 293 >seq155 Length=1069 Score = 331 bits (366), Expect = 1e-88 Identities = 230/258 (89%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 672 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 731 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | ||| || || | ||||||||||||||||| || Sbjct 732 CCTGTTATTGCCTCAAACTTCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGCG 791 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | || | || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct 792 ACC-AGCAAANCCGGCCTGGCTATTAAGCAGGTTAAGGTCNCGTTCGTTATCGGAATTAA 850 Query 182 CCAGACAAATCACTCCACCAA-CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||| |||||||||||||||| |||||||||||||||||||||||||| || ||||| || Sbjct 851 CCAG-CAAATCACTCCACCAACCTAAGAACGGCCATGCACCACCACCCNTAAAATCATGA 909 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 910 AAGAGCTATCAATCTGTC 927 >seq760 Length=1096 Score = 316 bits (350), Expect = 3e-84 Identities = 231/260 (89%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGC-TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1083 ACTCGCTGGCGTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1024 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||| ||||||||||||| ||| | ||| || || | ||||||||||||||||| || Sbjct 1023 ACCTG-TATTGCCTCAAAC-TCCGTCTGCTAGACGCAGACAGTCCCTCTAAGAAGCCGGC 966 Query 121 CACCAACCATAGTCGATGGGGCTATTTA-GCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 |||| | | || || ||||||| | |||||||||||||||||||| |||||||||| Sbjct 965 GACCAGCAAAAGCCGGCCTGGCTATTAAGGCAGGTTAAGGTCTCGTTCG-TATCGGAATT 907 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATG-CACCACCACCCATAGAATCAA 238 |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 906 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGACACCACCACCCATAAAATCAT 847 Query 239 GAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||| Sbjct 846 GAAAGAGCTATCAATCTGTC 827 >seq545 Length=1095 Score = 219 bits (242), Expect = 7e-55 Identities = 141/154 (92%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 105 CCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCG 164 ||||||||||||| || |||| | | || || ||||||| ||||||||||||||||| Sbjct 1095 CCTCTAAGAAGCCGGCGACCAGCAAAAGCCGGCCTGGCTATTAAGCAGGTTAAGGTCTCG 1036 Query 165 TTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1035 TTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 976 Query 225 ACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| ||||| |||||||||||||||||||| Sbjct 975 ACCCATAAAATCATGAAAGAGCTATCAATCTGTC 942 >seq538 Length=1087 Score = 178 bits (196), Expect = 2e-42 Identities = 113/121 (93%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 140 GGCTATTTAG--CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCC 197 ||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1064 GGCTATTAAAGCCAGGTTAAGGTCTC--TCGTTATCGGAATTAACCAGACAAATCACTCC 1007 Query 198 ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1006 ACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAAAGAGCTATCAATCTGT 947 Query 258 C 258 | Sbjct 946 C 946 >seq319 Length=1122 Score = 172 bits (190), Expect = 9e-41 Identities = 225/287 (78%), Gaps = 36/287 (13%) Strand=Plus/Minus Query 7 GTGGC-TCCGTCAGTGTAGCGCGCGTGC-GGCCCAGAA-CATC--TAAGGGCATCA-CA- 59 ||||| || ||||||||||||||||||| |||| |||| ||| ||||||||||| || Sbjct 974 GTGGCCTCTGTCAGTGTAGCGCGCGTGCCGGCCAAGAAACATACGTAAGGGCATCAACAC 915 Query 60 GACCT-GTTATT-GCCTC---AAACTTCCATTGGCTGGAAGC-CAATA---GTCCC-TCT 109 ||||| |||||| |||| || ||||| | ||| | | ||| | ||||| ||| Sbjct 914 GACCTTGTTATTCGCCTACTAAACCTTCCGTCTGCTAAGACCGCAAGACACGTCCCCTCT 855 Query 110 AA-GAAGCCAGCCACCAACCATAGTCGATGG--------GGCTATTTA-GCAGGTTAAGG 159 || |||||| | | | ||||| | | || ||||| ||| ||||||||||| Sbjct 854 AAAGAAGCCGGGC-CGAACCAGACAAAAAGGCCCGGCCTGGCTAATTAAGCAGGTTAAGG 796 Query 160 TCTCGTTCGTTATCGG--AATTAACCAG-ACAAATCACTCC-ACCAACTAA--GAA-CGG 212 |||||||||||| ||| |||||||||| |||||||||||| ||||||||| ||| ||| Sbjct 795 TCTCGTTCGTTANCGGTAAATTAACCAGAACAAATCACTCCAACCAACTAAAGGAACCGG 736 Query 213 CCATGCACCACCACCCATAGAATCA-AGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| ||| ||||| ||||||||||||||||||||| Sbjct 735 CCATGCACCACCACCAATAAAATCATAGAAAGAGCTATCAATCTGTC 689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796794010056