Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq698 118 6e-25 seq554 118 6e-25 seq609 116 2e-24 >seq698 Length=1023 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 770 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 825 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 826 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 875 >seq554 Length=1014 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 144 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 89 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 88 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 39 >seq609 Length=1006 Score = 116 bits (128), Expect = 2e-24 Identities = 96/112 (86%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || || |||||||||||||| || |||||| Sbjct 773 CCGTT-GCCGGCTCCCCGAAGCCAATCCCCAAGACCCTCACTAAGCCATT-CAATCGGTA 716 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 715 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300797811680