Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq760 223 4e-56 seq738 223 4e-56 seq733 223 4e-56 seq531 223 4e-56 seq472 223 4e-56 seq319 223 4e-56 seq518 215 6e-54 seq705 206 3e-51 seq538 203 4e-50 seq545 201 1e-49 seq578 172 7e-41 >seq760 Length=1096 Score = 223 bits (246), Expect = 4e-56 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 443 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 384 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 383 ATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAGGTCCTGGTTCCC 324 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 323 CGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 264 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 263 ACACCGTAAGGCGGACC 247 >seq738 Length=1298 Score = 223 bits (246), Expect = 4e-56 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 217 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 276 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 277 ATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAGGTCCTGGTTCCC 336 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 337 CGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 396 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 397 ACACCGTAAGGCGGACC 413 >seq733 Length=1375 Score = 223 bits (246), Expect = 4e-56 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 1190 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 1131 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1130 ATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAGGTCCTGGTTCCC 1071 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 1070 CGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 1011 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 1010 ACACCGTAAGGCGGACC 994 >seq531 Length=1063 Score = 223 bits (246), Expect = 4e-56 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 943 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 884 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 883 ATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAGGTCCTGGTTCCC 824 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 823 CGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 764 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 763 ACACCGTAAGGCGGACC 747 >seq472 Length=1029 Score = 223 bits (246), Expect = 4e-56 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 677 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 736 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 737 ATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAGGTCCTGGTTCCC 796 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 797 CGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 856 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 857 ACACCGTAAGGCGGACC 873 >seq319 Length=1122 Score = 223 bits (246), Expect = 4e-56 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 302 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 243 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 242 ATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAGGTCCTGGTTCCC 183 Query 121 CCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | ||||||| | || ||||| | |||||||||||||||| | | | | |||||| Sbjct 182 CGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 123 Query 179 TCGCCGTGAGGCGGACC 195 | |||| ||||||||| Sbjct 122 ACACCGTAAGGCGGACC 106 >seq518 Length=1135 Score = 215 bits (238), Expect = 6e-54 Identities = 168/198 (85%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 422 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 481 Query 61 ATTCGGGCGTAAGCCTGCTTTGAAC-ACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||||||| || ||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 482 ATTCGGGCATATGCCTGCTTTGAACTACTCTAATTTTCTCAAGGTAAAGGTCCTGGTTCC 541 Query 120 TCCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTA 177 | ||||||| | || ||||| | |||||||||||||||| | | | | ||||| Sbjct 542 CCGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTA 601 Query 178 CTCGCCGTGAGGCGGACC 195 | | |||| ||||||||| Sbjct 602 CACACCGTAAGGCGGACC 619 >seq705 Length=1217 Score = 206 bits (228), Expect = 3e-51 Identities = 169/201 (84%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAA-TAGGGACGCACGTCCTATTCTATTATT-CCATGCTAAT 58 || |||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||| Sbjct 298 CGACTCTAGAAACCAACAAAAATAGAACCGCACGTCCTATTTTATTATTTCCATGCTAAT 357 Query 59 GTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 |||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 358 GTATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAGGTCCTGGTTC 417 Query 119 CTCCGCACA--CCAATGAAGGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGC--A 174 | | ||||| ||| | ||||||| | |||||||||||||||| | | | | | | Sbjct 418 CCCGGCACACCCCAGTAAAGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACCTA 477 Query 175 GTACTCGCCGTGAGGCGGACC 195 |||| | |||| ||||||||| Sbjct 478 GTACACACCGTAAGGCGGACC 498 >seq538 Length=1087 Score = 203 bits (224), Expect = 4e-50 Identities = 167/200 (84%), Gaps = 5/200 (3%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 564 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 505 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTC--TCAAGGTAAA-AGTCCTGGTT 117 |||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 504 ATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCGTCCAAGGTAAAGGGTCCTGGTT 445 Query 118 CCTCCGCACACCAATGAA--GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAG 175 || | ||||||| | || ||||| | |||||||||||||||| | | | | ||| Sbjct 444 CCCCGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAG 385 Query 176 TACTCGCCGTGAGGCGGACC 195 ||| | |||| ||||||||| Sbjct 384 TACACACCGTAAGGCGGACC 365 >seq545 Length=1095 Score = 201 bits (222), Expect = 1e-49 Identities = 167/201 (83%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| Sbjct 559 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCCATTTTATTATTCCATGCTAATGT 500 Query 61 ATTCGGGCGTAAG-CCTGCTTTGAACACTCTAA-TTTTCTCAAGGTAAAAGTCCTGGTTC 118 |||||||| || | ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 499 ATTCGGGCATATGACCTGCTTTGAACACTCTAATTTTTCTCAAGGTAAAGGTCCTGGTTC 440 Query 119 CTCCGCACACCAATGAA----GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCA 174 | | ||||||| | || ||||| | |||||||||||||||| | | | | || Sbjct 439 CCCGGCACACCCAGTAAAAGGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACA 380 Query 175 GTACTCGCCGTGAGGCGGACC 195 |||| | |||| ||||||||| Sbjct 379 GTACACACCGTAAGGCGGACC 359 >seq578 Length=1094 Score = 172 bits (190), Expect = 7e-41 Identities = 134/159 (84%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 39 TTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCT 98 || ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 1 TTTTATTATTCCATGCTAATGTATTCGGGCATATGCCTGCTTTGAACACTCTAATTTTCT 60 Query 99 CAAGGTAAAAGTCCTGGTTCCTCCGCACACCAATGAA--GGCATACGGGCTCACCAAGAG 156 ||||||||| ||||||||||| | ||||||| | || ||||| | ||||||||||||| Sbjct 61 CAAGGTAAAGGTCCTGGTTCCCCGGCACACCCAGTAAAGGGCATGCCGGCTCACCAAGAG 120 Query 157 GTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGCGGACC 195 ||| | | | | |||||| | |||| ||||||||| Sbjct 121 GTAAGACCCAGCCAGACAGTACACACCGTAAGGCGGACC 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595195525584