Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29]
776 sequences; 33,668,918 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq760 230 2e-58
seq738 230 2e-58
seq733 230 2e-58
seq531 230 2e-58
seq472 230 2e-58
seq319 230 2e-58
seq518 223 4e-56
seq705 217 2e-54
seq545 217 2e-54
seq538 215 5e-54
seq578 105 7e-21
>seq760
Length=1096
Score = 230 bits (254), Expect = 2e-58
Identities = 165/189 (87%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||||
Sbjct 325 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 384
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 385 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 443
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 444 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 503
Query 181 TTGGATTTA 189
|||||||||
Sbjct 504 TTGGATTTA 512
>seq738
Length=1298
Score = 230 bits (254), Expect = 2e-58
Identities = 165/189 (87%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||||
Sbjct 335 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 276
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 275 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 217
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 216 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 157
Query 181 TTGGATTTA 189
|||||||||
Sbjct 156 TTGGATTTA 148
>seq733
Length=1375
Score = 230 bits (254), Expect = 2e-58
Identities = 165/189 (87%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||||
Sbjct 1072 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 1131
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 1132 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 1190
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 1191 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 1250
Query 181 TTGGATTTA 189
|||||||||
Sbjct 1251 TTGGATTTA 1259
>seq531
Length=1063
Score = 230 bits (254), Expect = 2e-58
Identities = 165/189 (87%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||||
Sbjct 825 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 884
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 885 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 943
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 944 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 1003
Query 181 TTGGATTTA 189
|||||||||
Sbjct 1004 TTGGATTTA 1012
>seq472
Length=1029
Score = 230 bits (254), Expect = 2e-58
Identities = 165/189 (87%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||||
Sbjct 795 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 736
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 735 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 677
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 676 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 617
Query 181 TTGGATTTA 189
|||||||||
Sbjct 616 TTGGATTTA 608
>seq319
Length=1122
Score = 230 bits (254), Expect = 2e-58
Identities = 165/189 (87%), Gaps = 1/189 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||||
Sbjct 184 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 243
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 244 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 302
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 303 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 362
Query 181 TTGGATTTA 189
|||||||||
Sbjct 363 TTGGATTTA 371
>seq518
Length=1135
Score = 223 bits (246), Expect = 4e-56
Identities = 165/190 (87%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGC-GTTCAAAGCAGGCCTTTGCTCGAAT 59
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||
Sbjct 541 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTAGTTCAAAGCAGGCATATGCCCGAAT 482
Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119
|||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 481 ACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG 422
Query 120 CCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179
|||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||
Sbjct 421 -CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATT 363
Query 180 CTTGGATTTA 189
||||||||||
Sbjct 362 CTTGGATTTA 353
>seq705
Length=1217
Score = 217 bits (240), Expect = 2e-54
Identities = 165/191 (86%), Gaps = 3/191 (2%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||||
Sbjct 418 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 359
Query 61 CATTACCATGG-AATAATAGAATAGGACGTGCGGTTCTA-TTTTGTAGGTTTCTAGGACC 118
||||| ||||| ||||||| ||||||||||||||||||| |||||| ||||||||| |
Sbjct 358 CATTAGCATGGAAATAATAAAATAGGACGTGCGGTTCTATTTTTGTTGGTTTCTAGAGTC 299
Query 119 GCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178
| |||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||
Sbjct 298 G-CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAAT 240
Query 179 TCTTGGATTTA 189
|||||||||||
Sbjct 239 TCTTGGATTTA 229
>seq545
Length=1095
Score = 217 bits (240), Expect = 2e-54
Identities = 165/191 (86%), Gaps = 3/191 (2%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGA-AAAAATTAGAGCGTTCAAAGCAGGCCTT-TGCTCGAA 58
||||||||||| ||||| |||| ||||||||||| |||||||||||| | | ||| ||||
Sbjct 439 GGAACCAGGACCTTTACCTTGAGAAAAATTAGAGTGTTCAAAGCAGGTCATATGCCCGAA 498
Query 59 TACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACC 118
||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||| |
Sbjct 499 TACATTAGCATGGAATAATAAAATGGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTC 558
Query 119 GCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178
| |||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||
Sbjct 559 G-CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAAT 617
Query 179 TCTTGGATTTA 189
|||||||||||
Sbjct 618 TCTTGGATTTA 628
>seq538
Length=1087
Score = 215 bits (238), Expect = 5e-54
Identities = 165/192 (86%), Gaps = 4/192 (2%)
Strand=Plus/Plus
Query 1 GGAACCAGGACT-TTTACTTTGAA--AAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA 57
||||||||||| ||||| ||| | |||||||||| ||||||||||||| | ||| |||
Sbjct 443 GGAACCAGGACCCTTTACCTTGGACGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGA 502
Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117
|||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 503 ATACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGT 562
Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177
|| |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||
Sbjct 563 CG-CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAA 621
Query 178 TTCTTGGATTTA 189
||||||||||||
Sbjct 622 TTCTTGGATTTA 633
>seq578
Length=1094
Score = 105 bits (116), Expect = 7e-21
Identities = 72/81 (89%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||||
Sbjct 81 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 22
Query 61 CATTACCATGGAATAATAGAA 81
||||| |||||||||||| ||
Sbjct 21 CATTAGCATGGAATAATAAAA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511996151040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |