Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq760 230 2e-58 seq738 230 2e-58 seq733 230 2e-58 seq531 230 2e-58 seq472 230 2e-58 seq319 230 2e-58 seq518 223 4e-56 seq705 217 2e-54 seq545 217 2e-54 seq538 215 5e-54 seq578 105 7e-21 >seq760 Length=1096 Score = 230 bits (254), Expect = 2e-58 Identities = 165/189 (87%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 325 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 384 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 385 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 443 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 444 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 503 Query 181 TTGGATTTA 189 ||||||||| Sbjct 504 TTGGATTTA 512 >seq738 Length=1298 Score = 230 bits (254), Expect = 2e-58 Identities = 165/189 (87%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 335 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 276 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 275 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 217 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 216 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 157 Query 181 TTGGATTTA 189 ||||||||| Sbjct 156 TTGGATTTA 148 >seq733 Length=1375 Score = 230 bits (254), Expect = 2e-58 Identities = 165/189 (87%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 1072 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 1131 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 1132 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 1190 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 1191 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 1250 Query 181 TTGGATTTA 189 ||||||||| Sbjct 1251 TTGGATTTA 1259 >seq531 Length=1063 Score = 230 bits (254), Expect = 2e-58 Identities = 165/189 (87%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 825 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 884 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 885 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 943 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 944 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 1003 Query 181 TTGGATTTA 189 ||||||||| Sbjct 1004 TTGGATTTA 1012 >seq472 Length=1029 Score = 230 bits (254), Expect = 2e-58 Identities = 165/189 (87%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 795 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 736 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 735 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 677 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 676 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 617 Query 181 TTGGATTTA 189 ||||||||| Sbjct 616 TTGGATTTA 608 >seq319 Length=1122 Score = 230 bits (254), Expect = 2e-58 Identities = 165/189 (87%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 184 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 243 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 244 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 302 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 303 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 362 Query 181 TTGGATTTA 189 ||||||||| Sbjct 363 TTGGATTTA 371 >seq518 Length=1135 Score = 223 bits (246), Expect = 4e-56 Identities = 165/190 (87%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGC-GTTCAAAGCAGGCCTTTGCTCGAAT 59 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| ||||| Sbjct 541 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTAGTTCAAAGCAGGCATATGCCCGAAT 482 Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119 |||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 481 ACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG 422 Query 120 CCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179 |||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||| Sbjct 421 -CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATT 363 Query 180 CTTGGATTTA 189 |||||||||| Sbjct 362 CTTGGATTTA 353 >seq705 Length=1217 Score = 217 bits (240), Expect = 2e-54 Identities = 165/191 (86%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 418 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 359 Query 61 CATTACCATGG-AATAATAGAATAGGACGTGCGGTTCTA-TTTTGTAGGTTTCTAGGACC 118 ||||| ||||| ||||||| ||||||||||||||||||| |||||| ||||||||| | Sbjct 358 CATTAGCATGGAAATAATAAAATAGGACGTGCGGTTCTATTTTTGTTGGTTTCTAGAGTC 299 Query 119 GCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178 | |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||| Sbjct 298 G-CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAAT 240 Query 179 TCTTGGATTTA 189 ||||||||||| Sbjct 239 TCTTGGATTTA 229 >seq545 Length=1095 Score = 217 bits (240), Expect = 2e-54 Identities = 165/191 (86%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGA-AAAAATTAGAGCGTTCAAAGCAGGCCTT-TGCTCGAA 58 ||||||||||| ||||| |||| ||||||||||| |||||||||||| | | ||| |||| Sbjct 439 GGAACCAGGACCTTTACCTTGAGAAAAATTAGAGTGTTCAAAGCAGGTCATATGCCCGAA 498 Query 59 TACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACC 118 ||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||| | Sbjct 499 TACATTAGCATGGAATAATAAAATGGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTC 558 Query 119 GCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178 | |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||| Sbjct 559 G-CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAAT 617 Query 179 TCTTGGATTTA 189 ||||||||||| Sbjct 618 TCTTGGATTTA 628 >seq538 Length=1087 Score = 215 bits (238), Expect = 5e-54 Identities = 165/192 (86%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 1 GGAACCAGGACT-TTTACTTTGAA--AAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA 57 ||||||||||| ||||| ||| | |||||||||| ||||||||||||| | ||| ||| Sbjct 443 GGAACCAGGACCCTTTACCTTGGACGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGA 502 Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117 |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct 503 ATACATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGT 562 Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177 || |||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||| Sbjct 563 CG-CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAA 621 Query 178 TTCTTGGATTTA 189 |||||||||||| Sbjct 622 TTCTTGGATTTA 633 >seq578 Length=1094 Score = 105 bits (116), Expect = 7e-21 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||| ||||| |||| |||||||||| ||||||||||||| | ||| |||||| Sbjct 81 GGAACCAGGACCTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATA 22 Query 61 CATTACCATGGAATAATAGAA 81 ||||| |||||||||||| || Sbjct 21 CATTAGCATGGAATAATAAAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511996151040